Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq609 145 1e-29 >seq609 Length=4955 Score = 145 bits (160), Expect = 1e-29 Identities = 268/393 (68%), Gaps = 14/393 (4%) Strand=Plus/Plus Query 161306 GTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAG 161365 ||||| |||||||||| || || ||| |||| || ||| || || ||||| Sbjct 1805 GTCCGCTTCTACCAGGCCTCGACGTCCGAGCTGTACGGTAAGGTGGCTGAAACGCCACAA 1864 Query 161366 AAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATAT 161425 || |||| ||||| ||||| || || || ||||||| || || | || ||||| Sbjct 1865 AACGAAAAGACACCGTTCTATCCGCGTTCGCCATATGCTTGCGCGAAGATGTACGGATAC 1924 Query 161426 TGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTC 161485 ||||| || | |||||| | ||| || | ||| |||| | | || ||||||||| Sbjct 1925 TGGATCGTGATAAACTACCGCGAGGCCTACGATATGTTCGCCTGCAACGGGATTCTATTC 1984 Query 161486 AACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACT-------AG 161538 ||||| |||||||| || ||||| |||| ||| || || || ||||| ||| | Sbjct 1985 AACCACGAGTCACCGCGCCGGGGAGAGAATTTTGTGACACGAAAGATCACTCGTTCGGTG 2044 Query 161539 GGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAACTC 161598 | || ||| | | | | ||| | ||| || || | |||||||||| |||| Sbjct 2045 GCGAAAATCTC--ACTCGGCCAG-----CTGGAATGCCTTGAATTAGGTAATCTCGACTC 2097 Query 161599 AAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACA 161658 || ||||| ||||| || || ||||||| ||||| || |||||| ||||| | || || Sbjct 2098 AAAGCGAGACTGGGGCCACGCCAAAGACTACGTGGAAGCCATGTGGCTGATGATGCAGCA 2157 Query 161659 GGAAACTCCTGATGACTATGTGATTGCCACAGG 161691 ||| | || || || | || || ||||| || Sbjct 2158 GGAGAAGCCGGAGGATTTCGTTATCGCCACCGG 2190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729463831922240