Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1636 435 4e-117 >seq1636 Length=7642 Score = 435 bits (482), Expect = 4e-117 Identities = 1216/1852 (66%), Gaps = 28/1852 (2%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || ||||| | |||||||| || ||||| || || | |||| ||||||||| Sbjct 5965 GCCGGCTTGGTACGCAAGTAGTACATGCCCGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 5906 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || ||| || ||| |||| | || || || | ||||| || | ||| || | Sbjct 5905 TGGATCGATGTCAGCTTGCCATAATTCGGTTCAGCCACGTGAATGTTGAACGACTGTGAT 5846 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCC 68574 ||||| || || ||||||| || || ||||| || || | | ||| | || ||| Sbjct 5845 TGATCTATAAACGCTCCTCGGTCGGCGGCCATCTTGATGGAAGTTTTTACTGATATCTCC 5786 Query 68575 CAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTATTTT---GAATGGAT 68631 || | || || |||| | || || | |||| |||| ||| | || ||| Sbjct 5785 CAGACCGTTTTGTAAATGTCACGAATCTCTTGGGGAATTTCCGTAATTTTCTGGATCGAT 5726 Query 68632 CCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAA 68691 || | | | |||| | | || ||||| | |||||| | |||||| || Sbjct 5725 CCGTTGTGCGCCAGAATTCGGTGTCTCATATCATCGTCCCACAAGCCACACTCCGTCAAG 5666 Query 68692 ACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAA 68751 | | |||||||| |||| || | ||||||||| || || | || | | | | ||| Sbjct 5665 TCCTTCAGGAGATGGTGATTCACCACTTGAAATTCTCCCGACAGGACGCGCCTATTATAA 5606 Query 68752 ATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCA 68811 | || || || ||||| | || ||||| || |||| |||||| || ||||| || Sbjct 5605 ACGTTCGATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCC 5546 Query 68812 GTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTT 68871 || ||||| ||||||| || || | ||| | || ||||| | || || ||||| Sbjct 5545 GTCGGCATCGGTGCCAACAGTAGAGAATTGCGAATGCCATGCTTGGCAATCTTCTCTTTC 5486 Query 68872 AGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATT 68931 | | ||| | ||| || || | ||| ||||| | |||||| || | || Sbjct 5485 AATTCCGCCCAGTTCCACAGGTCCGTAGGTGTCTTGTTCCACATATCGTACTGCAAGATA 5426 Query 68932 CCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCA 68991 || || ||| | || | || || || || ||||| || | |||| | || Sbjct 5425 CCCTTGCTTACCGGGCTACCTTCGTACGTCTCGTATGGTCCGTCACGGGCAGCCAACTCG 5366 Query 68992 CAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT 69051 || || ||||| || |||||||| || |||||||| || || | || |||||| | ||| Sbjct 5365 CAGCTAGCCTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTGCTGATTGAGTTTTTGG 5306 Query 69052 GCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACC 69111 || || ||| ||| |||| || | | || ||||| ||||| |||| || || || Sbjct 5305 GCCTCCTCACTCTCGTATGGGTATCGCATCAGGATAAACGCATCGGCCATACCTTGCACA 5246 Query 69112 CCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAA 69171 ||||||||||| || || || | | | || |||| || || |||| ||||| || Sbjct 5245 CCAATACCGATGGGCCTGTGGCGCATGTTCGAACGACGCGCCTCCGGAACCGGATAGTAG 5186 Query 69172 TTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTG 69231 || || || || ||||| || | ||||| ||| ||| | || || || |||||| Sbjct 5185 TTGATGTCGATGATTTTGTTCAAGTTTCGCGTTACGGTCTTAGCGACATCTTTCAGTTTG 5126 Query 69232 AGAAAATCAAATCGTCC-ATC---TATAACAAACATATTCAGTGCTACAGATGCTAGATT 69287 |||||| | ||| | ||| | | |||||||| || | || | ||||| ||||| Sbjct 5125 CCAAAATCGTA-CGTACGATCCGATCTCACAAACATGTTTAACGCGATCGATGCAAGATT 5067 Query 69288 ACAAACTGCTACCTCATTAGAATTTGCA---TATTGTATTATCTCTGTACATAGATTACT 69344 || || || | ||| | |||| | || | | ||||| || || || || Sbjct 5066 GCACACGGCAATCTCGTCC---TTTGAAGAGTACTCCACGATCTCCGTGCAAAGGTTTGA 5010 Query 69345 ACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAG 69404 || || || || |||| |||||||| || |||||| |||||| || |||||||| || Sbjct 5009 GCACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTTACACGCATCCTTGTACAG 4950 Query 69405 AATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGC 69464 || |||| || ||||| | ||| ||||| || || | ||| | | || || Sbjct 4949 CATGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATGGCAAACCACAGGTCCTGCGC 4890 Query 69465 ATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTT---CG 69519 |||| | | | ||| || | || || || || || ||||| || Sbjct 4889 CTTTACTTGG--CGAATAAAGCGACCTTCCTTCTCGTAGCCCTCGTA---CCGTTTCTCG 4835 Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579 || || || ||||| |||| |||||| || || |||| || ||||| | |||| Sbjct 4834 AACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGGCACATAAGACTCCAC 4775 Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAG 69638 | || | | ||| ||||| ||||| |||| ||| || |||||||| || ||| || | Sbjct 4774 ATTTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCAAAGGGC-ATAGAACAT 4716 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 |||| | | || || || ||||| || ||||| |||||||||||||| | | Sbjct 4715 GTCTCGCGCACGTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAACAC 4656 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758 |||| ||||| || || || || || || | |||| ||||| ||||| ||||| || Sbjct 4655 ATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTCCTTG 4596 Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818 ||| | ||| | || |||||||| || || | |||||||| | | |||||| || | Sbjct 4595 ATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGGAGAT 4536 Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTAT 69878 |||||||| || | || || |||| | || || ||| | | || || || Sbjct 4535 TCCATTTGTGCCCGCGATGTACGTTCCCTTCGCACGGATACAATGCACGTTCAGCCCAAT 4476 Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938 || || || || || || || || || |||||| || || || ||||| || || Sbjct 4475 GCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTATCGTAGATACCGTCAAT 4416 Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998 ||| || || ||| | | || || ||| ||| | || || || || |||| Sbjct 4415 GCTGTCGTCGGACATCGTCAACAGGAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCCGC 4356 Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 | ||| | || ||||| || || ||||| || || || ||||||||||| || || Sbjct 4355 AGCAAACATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCGACAGCAGATTGTACGTCTC 4296 Query 70059 AATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117 || || | || |||||| | | | ||||| || || || || ||||||| |||||||| Sbjct 4295 GATGGCCGCATCGATATCCTCGCCG-TGAATACCGATGGCAACGCGCATCAGCATATGCT 4237 Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177 | || ||||| || | || || ||||| | |||||| ||| |||| |||||||| Sbjct 4236 GGGGACGTTCGACGATCTTGCCCTTAATTTTGAGCAGGTAGGATCGCTCCAAAGTTTTAA 4177 Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 | || ||||| || || |||||| | ||||||||||| | ||||| || Sbjct 4176 AGCCGAAATAATTATAGCCAAAGTCGCGATCGTAAATAATGGCCGAATTGAG 4125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686470483494720