Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq20012 176 1e-38 seq50967 145 2e-29 seq42053 132 1e-25 seq3519 127 6e-24 seq41025 111 5e-19 seq3191 98.7 3e-15 seq41949 91.5 4e-13 seq41114 91.5 4e-13 seq34780 91.5 4e-13 seq30402 91.5 4e-13 seq2853 89.7 2e-12 >seq20012 Length=3655 Score = 176 bits (194), Expect = 1e-38 Identities = 178/232 (77%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140506 ACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 || |||||||||| | || | || || ||||| ||||| || || ||||||||||| | Sbjct 2481 ACTTACCACCACGAAGTCGCAACACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGT 2540 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 |||| || || || ||||| || || ||||| || || ||||| ||||| |||||||| | Sbjct 2541 CAGACAACGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTG 2600 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 | ||||| |||||||||||||| || || || || ||||| || || | ||||| || | Sbjct 2601 GTGGAATACCTTCTTTATCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCT 2660 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || | ||||| || || || ||||| || ||||||||||| Sbjct 2661 CGACCTCGAGAGTTATGGTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCAT 2712 >seq50967 Length=297 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 140534 ATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTG 140593 ||| ||||| || ||||| || || || ||||| || || || || |||||||| || || Sbjct 103 ATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTGCGACCATCTTCCAGCTG 162 Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 ||||| || ||||| ||||| || ||||| || || |||||||||||||||||||| || Sbjct 163 CTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCTTCTTTATCCTGAATCTT 222 Query 140654 AGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || || || || |||| ||| ||||| || || || || || | || || ||||| Sbjct 223 TGCCTTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGAGTGATCGTTTTGCCGGT 282 Query 140714 TAGTGTTTTTACAAA 140728 || ||||| || || Sbjct 283 CAGAGTTTTGACGAA 297 >seq42053 Length=1259 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || | || ||||| || ||||| || || || Sbjct 1239 CATACCACCACGCAGACGAAGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTC 1180 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || ||||| ||||| | ||| |||||||| || Sbjct 1179 GGACAGGGTGCGTCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGG 1120 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| || |||||||| ||||| || || | ||| || || || Sbjct 1119 GGGAATGCCTTCCTTGTCCTGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTC 1060 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || || |||||||| Sbjct 1059 GACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq3519 Length=1813 Score = 127 bits (140), Expect = 6e-24 Identities = 127/165 (77%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 140534 ATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTG 140593 ||| ||||| || ||||| || || || ||||| || || || || |||||||| || || Sbjct 1642 ATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTGCGACCATCTTCCAGCTG 1701 Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 ||||| || ||||| ||||| || ||||| || || |||||||| ||||||||||| || Sbjct 1702 CTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCTTCCTTATCCTGAATCTT 1761 Query 140654 AGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGT 140698 || || || || || |||| ||| ||||| || || || || || Sbjct 1762 TGCCTTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGAGT 1806 >seq41025 Length=2165 Score = 111 bits (122), Expect = 5e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 140604 AAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACA 140663 ||||| ||||| || ||||| || || |||||||| ||||||||||| || || || || Sbjct 2 AAGATAAGACGCTGTTGATCTGGTGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACG 61 Query 140664 TTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTT 140723 || || |||| ||| |||||||| || || || || | ||||||||||| || ||||| Sbjct 62 TTCTCGATCGTATCGGATGGTTCCACCTCGAGAGTGATCGTCTTTCCGGTCAGAGTTTTG 121 Query 140724 ACAAAAATCTGCAT 140737 || || || ||||| Sbjct 122 ACGAAGATTTGCAT 135 >seq3191 Length=5702 Score = 98.7 bits (108), Expect = 3e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 4630 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGGGGATCGATA 4689 Query 235950 CCCAGCATCTCCATACAATGAC 235971 ||| ||||||||||||||| || Sbjct 4690 CCCCGCATCTCCATACAATAAC 4711 >seq41949 Length=2992 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 1308 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1367 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 1368 CCCGGCATCTCCA 1380 >seq41114 Length=1318 Score = 91.5 bits (100), Expect = 4e-13 Identities = 148/208 (71%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || |||||| | || || || || || || || | ||| | |||| | ||||||||| Sbjct 172 GGTATCGATCTGGGCACGACGTACTCCTGCGTCGGTGTGTACAAAAACGGCCGTGTAGAA 231 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCG-AAAC 349323 || || || || ||||| |||||| | | ||||| || ||||| ||||| |||| || Sbjct 232 ATCATCGCCAACGATCAGGGTAACCGTATTACGCCCTCCTACGTGGCATTCACCGCCGAC 291 Query 349324 TGAG--CGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CTGCTAATCCAAAAAATAC 349380 ||| ||| |||| ||||| | || || || | || || | | ||||| |||| || Sbjct 292 GGAGAACGTCTGATCGGTGACGCGGCCAAGAA-CCAGTTGACGACGAATCCCGAAAACAC 350 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGGT 349408 ||| || || || |||||||| || ||| Sbjct 351 GGTGTTCGACGCAAAGCGACTGATCGGT 378 >seq34780 Length=2874 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 35 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 94 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 95 CCCGGCATCTCCA 107 >seq30402 Length=1361 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 73 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 14 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 13 CCCGGCATCTCCA 1 >seq2853 Length=3948 Score = 89.7 bits (98), Expect = 2e-12 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 235884 ATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGA 235943 |||| |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||| Sbjct 182 ATATCAGGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGA 123 Query 235944 TCAAAACCCAGCATCTCCA 235962 || | |||| ||||||||| Sbjct 122 TCGATACCCGGCATCTCCA 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514263344071544