Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1636 161 1e-34 >seq1636 Length=7642 Score = 161 bits (178), Expect = 1e-34 Identities = 565/868 (65%), Gaps = 22/868 (3%) Strand=Plus/Minus Query 79056 CGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCA 79115 |||||| || ||||||||||| |||||||| ||| ||| | ||| || ||||| Sbjct 5078 CGATGCAAGATTGCACACGGCAATCTCGTCCTTTGAAGAGTACTCCACGATCTCCGTGCA 5019 Query 79116 CAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTC 79175 | || || |||| || ||||| | ||| | |||||||||||| |||||| || || Sbjct 5018 AAGGTTTGAGCACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTTACACGCATC 4959 Query 79176 CTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGAT 79235 |||||| |||||||||| ||||| || ||||| | | | | | ||| | Sbjct 4958 CTTGTACAGCATGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATGGCAAACCACAG 4899 Query 79236 GTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTC 79295 |||| | ||| || | | ||||| | |||| | |||| | Sbjct 4898 GTCCTGCGCCTTTACTTGGCGAATAAAGCGACCTTCCTTCTCGTAGCCCTCGTACCGTTT 4839 Query 79296 GTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTG 79355 | ||| | || || | ||| | || || ||||| || ||||||||||| || Sbjct 4838 CTCGAACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGGCACATAAGACT 4779 Query 79356 CCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAA 79415 ||| |||| ||| || || |||||| | ||||| ||||| ||||| ||| Sbjct 4778 CCACATTTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCAAAGGGCATAGAA 4719 Query 79416 GAGGTCGCGGCAACGCATCTCCTCGTCGCCCTG-GTTCAGACGCAGCTCGAGAAAGTCCA 79474 | ||| || ||| | |||||| | ||||| |||| ||| |||||||| || | Sbjct 4718 CATGTCTCGCGCACGTACCTCCTCCTT-CCCTGTGTTCTTTTTCAGATCGAGAAACTCGA 4660 Query 79475 TGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGC 79534 | || |||||||||||||||| ||||| || || | || ||||| ||| | Sbjct 4659 ACACATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTC 4600 Query 79535 CCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGG 79594 | || | ||||||||| |||||||| ||| | || || ||||| ||||| | || | || Sbjct 4599 CTTGATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGG 4540 Query 79595 CGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGA-GCA-GTGGAT 79652 || || || || || ||| || || |||| || | | | | ||| || | Sbjct 4539 AGATTCCATTTGTGCCCGCGATGTACGTTCCCTTCGCACGGA--TACAATGCACGTTCAG 4482 Query 79653 TCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCC 79712 || ||||| |||| |||| || || | ||||||| || ||||| |||||||| || Sbjct 4481 CCCAATGCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTATCGTAGATACC 4422 Query 79713 CTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGG--GTTGTTC 79770 || || |||||| ||| | | |||||||||| || | ||| || ||||| Sbjct 4421 GTCAATGCTGTCGTCGGACATCGTCAACAGGAAGCAGGAAGAAAGCTGCGGACGTTGT-- 4364 Query 79771 GTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCT----CATCAG 79826 || | || || | || || | || || ||||| || | ||| || ||| Sbjct 4363 GTCGCCGCAGCAAACATAGTTGGAGAAGCATGGGTGAAAAA----TCGCTCCGACAGCAG 4308 Query 79827 ATCGTACGTCTCCTTGACGCGC-GGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCA 79885 || ||||||||| || | ||| || || |||||||| || |||| || ||||||| Sbjct 4307 ATTGTACGTCTCGATGGC-CGCATCGATATCCTCGCCGTGAATACCGATGGCAACGCGCA 4249 Query 79886 TGAAGAGGTACTGGGG-CGTCTCGCCGA 79912 | | | | |||||| ||| ||| ||| Sbjct 4248 TCAGCATATGCTGGGGACGT-TCGACGA 4222 Score = 138 bits (152), Expect = 1e-27 Identities = 303/447 (68%), Gaps = 8/447 (2%) Strand=Plus/Plus Query 19236 ACAAC--CCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 ||||| |||||| | || ||| ||||| || | ||| || ||||||||||| || Sbjct 4364 ACAACGTCCGCAGCTTTCTTCCTGCTTCCTGTTGACGATGTCCGACGACAGCATTGACGG 4423 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGAT 19353 |||||||| ||||| || ||||||| | || || |||| |||| || || ||| | Sbjct 4424 TATCTACGATACGCTGAAACAGTGCGCCCTGATATCAAAGTCAGCCGGTGGCATTGGGCT 4483 Query 19354 CCAC-TGC-TCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCC 19411 || ||| | | |||||| ||| || || ||| || || || ||| | || Sbjct 4484 GAACGTGCATTG--TATCCGTGCGAAGGGAACGTACATCGCGGGCACAAATGGAATCTCC 4541 Query 19412 GACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGG 19471 | ||| | || || ||||| ||||| | ||| |||||||| |||||||| | || || Sbjct 4542 AATGGTTTGGTGCCGATGCTTCGCGTGTACAATAACACGGCGCGGTACGTCGATCAAGGA 4601 Query 19472 GGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATG 19531 ||| || || || | || || |||||||| ||||| ||||||| || || | Sbjct 4602 GGCAATAAGCGACCCGGAGCATTTGCAATCTACCTGGAGCCGTGGCACGGTGATGTGTTC 4661 Query 19532 GATTTCCTCGAACTGCGCCTGAAC-CAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTT 19590 || || ||||| ||| |||| ||||| | |||||| | || || ||| | || Sbjct 4662 GAGTTTCTCGATCTGAAAAAGAACACAGGGA-AGGAGGAGGTACGTGCGCGAGACATGTT 4720 Query 19591 CACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCA 19650 | ||| | ||||| ||||| |||||||| || || ||| ||||| ||| Sbjct 4721 CTATGCCCTTTGGATACCGGATTTATTCATGAAGCGAGTGGAGGCTAACGAAATGTGGAG 4780 Query 19651 CCTGATGTGCCCGCACGAATGCCCTGG 19677 || ||||||||||| || ||||| || Sbjct 4781 TCTTATGTGCCCGCATGATTGCCCCGG 4807 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || ||||| |||||||||||||| || || ||| ||||||| ||||| | || || Sbjct 5956 GTACGCAAGTAGTACATGCCCGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGGATCGAT 5897 Query 78250 GACAGCTTGGCCAGACTCGGGTTC-TCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | |||||| |||| | | ||||| ||| | ||||||| |||||| || || || || Sbjct 5896 GTCAGCTT-GCCATAATTCGGTTCAGCCACGTGAATGTTGAACGACTGTGATTGATCTAT 5838 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGA-ATCTCCCAGATGG 78367 |||| || |||||||| ||||| | |||| | |||| | || |||||||||| | Sbjct 5837 AAACGCTCCTCGGTCGGCGGCCATCTTGATGGAAG-TTTTTACTGATATCTCCCAGACCG 5779 Query 78368 TCCGGTAAATG 78378 | ||||||| Sbjct 5778 TTTTGTAAATG 5768 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606 |||||||| ||||| | ||| ||||| |||| || || ||||| || || |||||||| Sbjct 5596 GTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCGTCGGCATC 5537 Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGC 78639 ||||| | |||||||||||| |||| |||||| Sbjct 5536 GGTGCCAACAGTAGAGAATTGCGAATGCCATGC 5504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548174786325120