Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq20012 170 2e-37 seq42053 143 3e-29 seq20890 140 4e-28 seq609 136 5e-27 seq1636 132 5e-26 seq41025 98.7 1e-15 seq38620 89.7 6e-13 >seq20012 Length=3655 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| ||||| || || ||||| || ||||| ||||| ||| | | Sbjct 2712 ATGCAGATTTTCGTCAAAACGCTCACTGGGAAGACCATAACTCTCGAGGTCGAGCCCTCT 2653 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | |||| ||||||| || || ||||| || || || ||||| ||||| ||| Sbjct 2652 GACACCATCGAAAATGTGAAGGCAAAGATCCAGGATAAAGAAGGTATTCCACCAGATCAG 2593 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || || || || ||||||| |||||| | | ||||||||| Sbjct 2592 CAGCGTCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACGTTGTCTGACTATAAT 2533 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || ||||| || || ||||| ||||| ||||| Sbjct 2532 ATTCAGAAGGAATCTACCCTTCACCTGGTGTTGCGACTTCGTGGTGG 2486 >seq42053 Length=1259 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || ||||| ||||| ||| | Sbjct 1009 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCG 1068 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| |||| ||||| || ||||||||||| || ||||| ||||| ||| Sbjct 1069 GATACTATCGAGAATGTGAAAGCTAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 1128 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||| ||||| || ||||| | || ||||| | ||||| || Sbjct 1129 CAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGACGCACCCTGTCCGACTACAAC 1188 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || | || | ||| | ||||| || ||||| Sbjct 1189 ATTCAGAAGGAGTCGACCTTGCACTTGGTCCTTCGTCTGCGTGGTGG 1235 >seq20890 Length=2679 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| ||||| ||||||||||| | Sbjct 1636 ATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAACCCTCG 1577 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| |||| || || || |||||||||||||| || || ||||| ||| Sbjct 1576 GATACGATCGAGAATGTGAAAGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGATCAG 1517 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| || || ||||| || ||||| | || || || | || || || Sbjct 1516 CAGCGTCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGACGCACGCTGTCTGATTACAAC 1457 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || |||||||| || | || || || ||||| Sbjct 1456 ATTCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGTGGTGG 1410 >seq609 Length=4955 Score = 136 bits (150), Expect = 5e-27 Identities = 351/535 (66%), Gaps = 11/535 (2%) Strand=Plus/Plus Query 24584 CGAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCGTTTGACCAACCCGAGTA 24643 ||| || || ||||| | || || ||||||||| | |||||||||| ||| || Sbjct 1672 CGAAGTTTACAACCTGGCCGCGCAAAGCCACGTCAAGATTTCGTTTGACCTGAGCGAATA 1731 Query 24644 CACGGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNNNN 24703 |||||| | || || || | ||||| ||| || |||| || || || ||| Sbjct 1732 CACGGCTGAGGTAGACGCGGTGGGCACGCTACGACTTCTAGATGCCATCCGCACGGTGGG 1791 Query 24704 NNNNNNNTTGAAAT---TCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGT 24760 |||| || | || || ||||| ||| ||| ||| || ||||| Sbjct 1792 GCAGGAA---AAATCTGTCCGCTTCTACCAGGCCTCGACGTCCGAGCTGTACGGTAAGGT 1848 Query 24761 GCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTC 24820 | || |||||||| || | || || || |||||||| || |||| | | Sbjct 1849 GGCTGAAACGCCACAAAACGAAAAGACACCGTTCTATCCGCGTTCGCCATATGCTTGCGC 1908 Query 24821 AAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATG 24880 ||| ||| || |||||||| | |||||||| |||||| | | || | || || Sbjct 1909 GAAGATGTACGGATACTGGATCGTGATAAACTACCGCGAGGCCTACGATATGTTCGCCTG 1968 Query 24881 CAACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCTGAATTTGTTACACGAAA 24940 |||||| ||||| |||||||| ||||| ||| |||||| | ||||| |||||||| Sbjct 1969 CAACGGGATTCTATTCAACCACGAGTCACCGCGCCGGGGAGAGAATTTTGTGACACGAAA 2028 Query 24941 GATTACTC--TTGGTATTGACCATTGGATCAAGACAAG--GGCACCTATTGAGCTGGGAA 24996 ||| |||| | ||| || || | | | | || || | |||| | || | Sbjct 2029 GATCACTCGTTCGGTGGCGAAAATCTCA-CTCGGCCAGCTGGAATGCCTTGAATTAGGTA 2087 Query 24997 ACCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTACGTCGACGCCATGTGGCGCA 25056 | || || | || || || ||||| || || |||||||| || |||||||||| | Sbjct 2088 ATCTCGACTCAAAGCGAGACTGGGGCCACGCCAAAGACTACGTGGAAGCCATGTGGCTGA 2147 Query 25057 TGCTCCAACAGAATAAGCCAGAGGATTTTGTGATCGGCACCGGTCAGACGCATTC 25111 || | || ||| | ||||| |||||||| || |||| |||||| |||| ||||| Sbjct 2148 TGATGCAGCAGGAGAAGCCGGAGGATTTCGTTATCGCCACCGGAGAGACACATTC 2202 >seq1636 Length=7642 Score = 132 bits (146), Expect = 5e-26 Identities = 689/1070 (64%), Gaps = 52/1070 (5%) Strand=Plus/Minus Query 80709 CATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTT 80768 ||||| || ||| | || |||| || || || || || |||| || | ||||||| | Sbjct 5279 CATCAGGATAAACGCATCGGCCATACCTTGCACACCAATACCGATGGGCCTGTGGCGCAT 5220 Query 80769 GTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTT 80828 |||||| || |||||||||| || || |||| | ||||||| ||||| ||| Sbjct 5219 GTTCGAACGACGCGCCTCCGGAACCGGATAGTAGTTGATGTCGATGATTTTGTTCAAGTT 5160 Query 80829 GCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA--TTGGTTCCCCT-T 80885 || || || | | ||||| | ||||| ||| ||| | | | ||| | | Sbjct 5159 TCGCGTTACGGTCTTAGCGACATCTTTCAGTTTGCCAAAATCGTACGTACGATCCGATCT 5100 Query 80886 CACAAA--TGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCT 80943 |||||| || || || | || || |||||||||||||| | ||| | | | | Sbjct 5099 CACAAACATGTTT-AACGCG-ATCGATGCAAGATTGCACACGGCAATCTCGT---CCTTT 5045 Query 80944 GTA---AACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTC 81000 | | |||| ||||| |||||||| | || || |||| ||||| |||| ||||| | Sbjct 5044 GAAGAGTACTCCACGATCTCCGTGCAAAGGTTTGAGCACTTTATTGTGCCCACGTTTTGC 4985 Query 81001 TGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACC 81060 ||||| ||| ||| || || |||||||| ||||||||| ||||| || ||| Sbjct 4984 TGGTTGCTCTTTCGGTTACACGCATCCTTGTACAGCATGTACGGCACGCCGGTTTCCACC 4925 Query 81061 TGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAAT----TT 81116 ||||| | | ||||| ||| | || ||||||| | |||| |||| Sbjct 4924 TGTGATTCAATTATGGCAAACCACAGGTCCTGCGCCTTTA----CTTGGCGAATAAAGCG 4869 Query 81117 GCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAA--CTTGGCACCGTGAAGTTCAGTG 81174 ||||| | | || |||| || ||||| ||| || || ||| |||| Sbjct 4868 ACCTTCCTTCTCGTAGCCCTCGTACCGTTTCTCGAACTCTTCGCCCCACGAA--TCAGAC 4811 Query 81175 AGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTT---CTCTACAGCC 81231 | | ||||| || | |||||||| || ||| | ||||| ||| || | Sbjct 4810 AATCCGGGGCAATCATGCGGGCACATAAGACTCCA---CATTTCGTTAGCCTCCACTCGC 4754 Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290 |||||||| || || ||||| ||||| ||||| ||| || ||| || ||||||| Sbjct 4753 TTCATGAATAAATCCGGTATCCAAAGGGCATAGAACATGTCTCGCGCA-CGTACCTCCTC 4695 Query 81291 ATCACCCTG-GTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCA 81349 | ||||| ||| || |||||||| || | | || | ||||| ||||||| Sbjct 4694 CT-TCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAACACATCACCGTGCCACGGCTCCA 4636 Query 81350 GATACACGGCGATCGACCC--CTTGC-GACGGCCACCCTGGTTGACGTAACGGGCAGTCG 81406 | || | || | | || | || | ||| || || | |||||| || || || Sbjct 4635 GGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTCCTTGATCGACGTACCGCGC---CG 4579 Query 81407 CGTTA-AATACACGC--AACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGA 81463 |||| ||||||| | ||| || | | ||||| || || || || ||| ||| Sbjct 4578 TGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGGAGATTCCATTTGTGCCCGCGA 4519 Query 81464 TACGCGACCCCTTGGCGCG--CACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTT 81521 | || ||||| || || || ||| || || || |||||||| | |||| Sbjct 4518 TGTACGTTCCCTTCGCACGGATACAATGCACGTT--CAGCCCAATGCCACCGGCTGACTT 4461 Query 81522 TGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCAT 81581 ||| ||| | || ||| | |||| || || || || || || ||||| || | ||| Sbjct 4460 TGATATCAGGGCGCACTGTTTCAGCGTATCGTAGATACCGTCAATGCTGTCGTCGGACAT 4401 Query 81582 -GTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTG 81640 ||||| || ||| ||| || | ||| || | || || | ||| |||| |||| Sbjct 4400 CGTCAA-CAGGAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCCGCAGCAAACATAGTTG 4342 Query 81641 GGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGA 81699 | | || || ||||| | || | |||| ||| | || || || | | ||| | | Sbjct 4341 GAGAAGCATGGGTGAAAAATCGCTCCGACAGCAGATTGTACGTCTCGATGGCCGCATCG- 4283 Query 81700 ATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 ||||| || |||||||||||||| || || ||||| | ||| | |||||| Sbjct 4282 ATATCCTCGCCGTGAATACCGATGGCAACGCGCATCAGCATATGCTGGGG 4233 >seq41025 Length=2165 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || || ||||| ||||| || ||||| ||||| || || Sbjct 135 ATGCAAATCTTCGTCAAAACTCTGACCGGAAAGACGATCACTCTCGAGGTGGAACCATCC 76 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | ||||| || |||||||| ||||| ||||| || ||||| || Sbjct 75 GATACGATCGAGAACGTCAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCAGATCAA 16 Query 27526 CAGCGTCTAATTTT 27539 |||||||| || || Sbjct 15 CAGCGTCTTATCTT 2 >seq38620 Length=1898 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 64774 ATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATC 64833 ||||||||||| || ||||| ||| |||||||||| || |||| ||||||||||||||| Sbjct 132 ATTTTCTGGCTTAAGAAGCGCGGCTTGATGCCAGGACTCACGTTCTCGAACGAGCTGATC 73 Query 64834 TCTCGGGACGAGGGGCTCCACCAAGAATTTGC 64865 || || ||||| || || ||| || ||||| Sbjct 72 TCGCGCGACGAAGGACTGCACTGCGACTTTGC 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569946484933760