Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq50967 91.5 1e-13 seq3519 89.7 4e-13 >seq50967 Length=297 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || |||||||| | ||| || || || || | || || |||||||| || |||| Sbjct 213 GATAAAGAAGGAATCCCGCCAGATCAACAGCGTCTTATCTTCGCCGGAAAGCAGCTGGAA 154 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| |||||| |||||||||||||| ||||| ||| |||||||||| ||| Sbjct 153 GATGGTCGCACCTTGTCGGATTACAACATCCAGAAAGAATCGACTCTGCATTTGGTGTTG 94 Query 28003 CGTTTGCGTGGCGGC 28017 ||| |||| || ||| Sbjct 93 CGTCTGCGAGGAGGC 79 >seq3519 Length=1813 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || || ||||| | ||| || || || || | || || |||||||| || |||| Sbjct 1752 GATAAGGAAGGAATCCCGCCAGATCAACAGCGTCTTATCTTCGCCGGAAAGCAGCTGGAA 1693 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| |||||| |||||||||||||| ||||| ||| |||||||||| ||| Sbjct 1692 GATGGTCGCACCTTGTCGGATTACAACATCCAGAAAGAATCGACTCTGCATTTGGTGTTG 1633 Query 28003 CGTTTGCGTGGCGG 28016 |||||||| || || Sbjct 1632 CGTTTGCGAGGAGG 1619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355641001097496