Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq20012 163 7e-35 seq50967 156 1e-32 seq20890 154 3e-32 seq42053 149 1e-30 seq3519 149 1e-30 seq41025 114 3e-20 >seq20012 Length=3655 Score = 163 bits (180), Expect = 7e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| | || |||||||| || || || || || || ||||| || | | || Sbjct 2491 ACGAAGTCGCAACACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGTCAGACAACGT 2550 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||||||| ||||| |||||||| || || || || || || |||| || Sbjct 2551 ACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGAATACC 2610 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| || |||||||||||| ||||| |||||||||||||||||| || |||||||| Sbjct 2611 TTCTTTATCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCTCGACCTCGAG 2670 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| || ||||| || ||||| || || || || | |||||| || Sbjct 2671 AGTTATGGTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCATCTT 2715 >seq50967 Length=297 Score = 156 bits (172), Expect = 1e-32 Identities = 151/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || ||||| |||||||| ||||||| | ||| | ||||||||||||||| Sbjct 104 TGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTGCGACCATCTTCCAGCTGC 163 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||||||||| || ||||| || || || | |||||| || ||||| |||||| Sbjct 164 TTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCTTCTTTATCCTGAATCTTT 223 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || ||||| ||||| || || || || ||||||||||||||||| || || || Sbjct 224 GCCTTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGAGTGATCGTTTTGCCGGTC 283 Query 211092 AGAGTCTTTACAAA 211105 ||||| || || || Sbjct 284 AGAGTTTTGACGAA 297 >seq20890 Length=2679 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || ||||| || ||||| || || ||||| ||||| | || || | ||| || Sbjct 1425 AGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGACAGCGTGCGTCCGTCC 1484 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || || || || || || || || | || ||||||||| Sbjct 1485 TCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCC 1544 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||| || ||||| || || ||| ||||||||| || || || ||| Sbjct 1545 TGGATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAACCTCAAGGGTAATGGTC 1604 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 || |||||||| || || || || | |||||| || || Sbjct 1605 TTACCCGTGAGGGTTTTCACGAAGATCTGCATCTTGTG 1642 >seq42053 Length=1259 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | || ||||| || || ||||| || || | ||||| | ||| || Sbjct 1220 AGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCC 1161 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || || || || |||| |||||||||||| Sbjct 1160 TCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 1101 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||| || ||||| || || || || ||||| |||||||| ||| Sbjct 1100 TGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACCTCCAGAGTGATGGTC 1041 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | |||||| Sbjct 1040 TTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq3519 Length=1813 Score = 149 bits (164), Expect = 1e-30 Identities = 135/170 (79%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || ||||| |||||||| ||||||| | ||| | ||||||||||||||| Sbjct 1643 TGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTGCGACCATCTTCCAGCTGC 1702 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||||||||| || ||||| || || || | ||||||||| ||||| |||||| Sbjct 1703 TTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCTTCCTTATCCTGAATCTTT 1762 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 || ||||| ||||| || || || || ||||||||||||||||| Sbjct 1763 GCCTTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGAGTGATCGT 1812 >seq41025 Length=2165 Score = 114 bits (126), Expect = 3e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 210980 GAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCAC 211039 ||||||||| || ||||| || || || | ||||||||| ||||| |||||| || || Sbjct 1 GAAGATAAGACGCTGTTGATCTGGTGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGAC 60 Query 211040 GTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTT 211099 ||| ||||| || || || ||| ||||||||||||||||||||||| || ||||| || Sbjct 61 GTTCTCGATCGTATCGGATGGTTCCACCTCGAGAGTGATCGTCTTTCCGGTCAGAGTTTT 120 Query 211100 TACAAACACCTGCATTTT 211117 || || | ||||| || Sbjct 121 GACGAAGATTTGCATGTT 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158393853736520