Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1636 412 5e-110 >seq1636 Length=7642 Score = 412 bits (456), Expect = 5e-110 Identities = 1208/1852 (65%), Gaps = 28/1852 (2%) Strand=Plus/Minus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || || || ||||| | |||||||| || ||||| || |||| |||| ||||||||| Sbjct 5965 GCCGGCTTGGTACGCAAGTAGTACATGCCCGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 5906 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || || |||||| ||| |||| | || || || | ||||| || | |||||| | Sbjct 5905 TGGATCGATGTCAGCTTGCCATAATTCGGTTCAGCCACGTGAATGTTGAACGACTGTGAT 5846 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982 ||||| || || ||||||| || || ||||| || || || ||| | || ||| Sbjct 5845 TGATCTATAAACGCTCCTCGGTCGGCGGCCATCTTGATGGAAGTTTTTACTGATATCTCC 5786 Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAA 77039 || | |||||| ||| | || || | |||| | ||| ||| | || || Sbjct 5785 CAGACCGTTTTGTAAATGTCACGAATCTCTTGGGGAATTTCCGTAATTTTCTGGATCGAT 5726 Query 77040 CCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAA 77099 || | | | |||| | | |||||||| | |||||| | ||| || || Sbjct 5725 CCGTTGTGCGCCAGAATTCGGTGTCTCATATCATCGTCCCACAAGCCACACTCCGTCAAG 5666 Query 77100 ACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 77159 | | |||||||| |||| || | |||||||||||| |||| || | | | | ||| Sbjct 5665 TCCTTCAGGAGATGGTGATTCACCACTTGAAATTCTCCCGACAGGACGCGCCTATTATAA 5606 Query 77160 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCA 77219 | || || || ||||| | || |||||||| ||||||||||| || || ||||| Sbjct 5605 ACGTTCGATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCC 5546 Query 77220 GTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 77279 || ||||| ||||||| || || | ||| | | ||||| | || || ||||| Sbjct 5545 GTCGGCATCGGTGCCAACAGTAGAGAATTGCGAATGCCATGCTTGGCAATCTTCTCTTTC 5486 Query 77280 AGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATT 77339 | | ||| | ||| || || | |||| | ||| | |||||| || | || Sbjct 5485 AATTCCGCCCAGTTCCACAGGTCCGTAGGTGTCTTGTTCCACATATCGTACTGCAAGATA 5426 Query 77340 CCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCA 77399 || || || | || | || || || || ||||| || |||| | || Sbjct 5425 CCCTTGCTTACCGGGCTACCTTCGTACGTCTCGTATGGTCCGTCACGGGCAGCCAACTCG 5366 Query 77400 CAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT 77459 || || || ||||| || ||||| || |||||||| || || | || |||||| | ||| Sbjct 5365 CAGCTAGCCTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTGCTGATTGAGTTTTTGG 5306 Query 77460 GCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACT 77519 || || ||| || | || || | | || ||||| ||||| || | || || || Sbjct 5305 GCCTCCTCACTCTCGTATGGGTATCGCATCAGGATAAACGCATCGGCCATACCTTGCACA 5246 Query 77520 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAA 77579 |||||||| || || || || | | | || ||| || || |||| ||||| || Sbjct 5245 CCAATACCGATGGGCCTGTGGCGCATGTTCGAACGACGCGCCTCCGGAACCGGATAGTAG 5186 Query 77580 TTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTA 77639 || ||||| || ||||| || | |||| || ||| | || || || ||||| Sbjct 5185 TTGATGTCGATGATTTTGTTCAAGTTTCGCGTTACGGTCTTAGCGACATCTTTCAGTTTG 5126 Query 77640 AGAAAATCAAATCTTCCATC---TATAACAAACATGTTCAAAGCTATAGATGCTAGATTA 77696 |||||| | | | ||| | | ||||||||||| || || || ||||| ||||| Sbjct 5125 CCAAAATCGTACGTACGATCCGATCTCACAAACATGTTTAACGCGATCGATGCAAGATTG 5066 Query 77697 CAAACTGCTACCTCATTAGCGTTG--GCATATTGTATTATCTCGGTACATAGATTACTAC 77754 || || || | ||| | | ||| | || | | ||||| || || || || | Sbjct 5065 CACACGGCAATCTCGTC--CTTTGAAGAGTACTCCACGATCTCCGTGCAAAGGTTTGAGC 5008 Query 77755 ATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAA 77814 | || || ||||||| ||||| |||||||||||| || || | ||||| || || | Sbjct 5007 ACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTTACACGCATCCTTGTACAGCA 4948 Query 77815 TAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 77874 | |||| |||||||| | ||||||||| || || | ||| | | | || | Sbjct 4947 TGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATGGCAAACCACAGGTCCTGCGCCT 4888 Query 77875 TTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTT---CAAATT 77931 ||| | | || || | || ||| | | || ||||| | || | Sbjct 4887 TTAC--TTGGCGAATAAAGCGACCTTCCTTCTCGTAGCCCTCGTA-CCGTTTCTCGAACT 4831 Query 77932 CATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCAC 77991 | || ||||| |||| |||||| ||||| |||| |||||||| | ||| || Sbjct 4830 CTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGGCACATAA--GAC---TCCA 4776 Query 77992 CATCTTCCTTA------ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 78045 ||| ||| ||| ||||| ||||| || | ||| |||||||| || ||| || | Sbjct 4775 CAT-TTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCAAAGGGCATAGAACA 4717 Query 78046 GATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAA 78105 ||||| | | || || || ||||| |||||||| |||||||||||||| | | Sbjct 4716 TGTCTCGCGCACGTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAACA 4657 Query 78106 TATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCT 78165 |||| ||||| || || || || ||||| | |||| ||||| ||||| ||||| | Sbjct 4656 CATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTCCTT 4597 Query 78166 GATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATG 78225 |||| | || | || |||||||| || || | | ||| || | | ||| || || Sbjct 4596 GATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGGAGA 4537 Query 78226 TTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTA 78285 |||||||||| || | || || |||| | || || ||| | | | | ||| | Sbjct 4536 TTCCATTTGTGCCCGCGATGTACGTTCCCTTCGCACGGATACAATGCACGTTCAGCCCAA 4477 Query 78286 TTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTA 78345 | || || || ||| ||||| || ||||| |||||| |||||||||||||| || | Sbjct 4476 TGCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTATCGTAGATACCGTCAA 4417 Query 78346 TACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTG 78405 | ||||| || ||| | | || || ||| ||| | || || | || | | Sbjct 4416 TGCTGTCGTCGGACATCGTCAACAGGAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCCG 4357 Query 78406 CATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTT 78465 || ||| | || ||||| ||||| || || || || || || |||||||| || | Sbjct 4356 CAGCAAACATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCGACAGCAGATTGTACGTCT 4297 Query 78466 CAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCT 78525 | || || | || || ||| ||||| || | || || ||||||| |||||||| Sbjct 4296 CGATGGCCGCATCGATATCCTCGCCGTGAATACCGATGGCAACGCGCATCAGCATATGCT 4237 Query 78526 GAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAA 78585 | || | ||| || |||| || ||||| | || ||| ||| ||||||||||||| Sbjct 4236 GGGGACGTTCGACGATCTTGCCCTTAATTTTGAGCAGGTAGGATCGCTCCAAAGTTTTAA 4177 Query 78586 AACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAG 78637 | || ||||| || || |||||| | ||||||||||| | ||||| || Sbjct 4176 AGCCGAAATAATTATAGCCAAAGTCGCGATCGTAAATAATGGCCGAATTGAG 4125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694225531838720