Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq50967 89.7 4e-13 >seq50967 Length=297 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 111109 TTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTT 111168 || |||||||| ||||||||||||| || || | || ||| || |||| | | Sbjct 297 TTCGTCAAAACTCTGACCGGCAAAACGATCACTCTCGAGGTGGAGCCATCCGATACGATC 238 Query 111169 GGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATCAACAAAGGCT 111227 | | || || ||| ||| || |||||||| | |||| | |||||||| | || Sbjct 237 GAGAACGTCAAGGCAAAGATTCAGGATAAAGAAGGAAT-CCCGCCAGATCAACAGCGTCT 179 Query 111228 TATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAA 111287 ||| | || || || || |||||||| | || || | ||||| || || || || Sbjct 178 TATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACCTTGTCGGATTACAACATCCAGAA 119 Query 111288 AGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 |||||| || || ||||| |||||||||||||| || |||| Sbjct 118 AGAATCGACTCTGCATTTGGTGTTGCGTCTGCGAGGAGGCA 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421548771216448