Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq42053 181 2e-40 seq20890 172 1e-37 seq20012 149 1e-30 seq50967 131 4e-25 seq3519 114 3e-20 seq609 109 1e-18 seq41025 100 6e-16 seq3179 100 6e-16 seq47782 86.0 1e-11 seq40584 86.0 1e-11 seq36132 86.0 1e-11 seq17875 86.0 1e-11 seq7860 86.0 1e-11 >seq42053 Length=1259 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| |||| || || || || || || ||||||||||| | Sbjct 1236 ACCACCACGCAGACGAAGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGA 1177 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || || || || || ||||||||||| || || || || Sbjct 1176 CAGGGTGCGTCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGG 1117 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| ||||| || | |||||||| ||||||| ||||| Sbjct 1116 AATGCCTTCCTTGTCCTGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGAC 1057 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || |||| |||||| ||||| |||||||| Sbjct 1056 CTCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq20890 Length=2679 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||||||||| |||||||| | || || || || |||||||| |||| Sbjct 1410 CCACCACGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGAC 1469 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| || |||| ||| || || || || Sbjct 1470 AGCGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGGG 1529 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| ||||| || | ||||| || ||||| | ||| || Sbjct 1530 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAACC 1589 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || || ||||||||||| | || || ||||| |||||||| || Sbjct 1590 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATCTT 1639 >seq20012 Length=3655 Score = 149 bits (164), Expect = 1e-30 Identities = 180/244 (74%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 282859 AAATAAAACGTGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGA 282918 |||||| || | ||||||||| || || | ||||| || | || ||| || || | Sbjct 2474 AAATAACACTT--ACCACCACGAAGTCGCAACACCAGGTGAAGGGTAGATTCCTTCTGAA 2531 Query 282919 TGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTT 282978 | || ||||||| | ||| || |||||||| || ||||| ||||| ||||||| ||| | Sbjct 2532 TATTATAGTCAGACAACGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCT 2591 Query 282979 GTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGT 283038 | || || |||||||| || || || ||||||||||| || || | ||||| |||| Sbjct 2592 GCTGATCTGGTGGAATACCTTCTTTATCCTGGATCTTTGCCTTCACATTTTCGATGGTGT 2651 Query 283039 CCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 | || | ||||| |||||||| || ||||| || || | || || ||||| ||||||| Sbjct 2652 CAGAGGGCTCGACCTCGAGAGTTATGGTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCA 2711 Query 283099 TTTT 283102 | || Sbjct 2712 TCTT 2715 >seq50967 Length=297 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 || || ||||| || | |||| ||| | || |||||| ||||||||||| || | | Sbjct 80 CCTCCTCGCAGACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGAC 139 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || || || || ||||| ||||| | ||| ||||| || ||| Sbjct 140 AAG-GTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGG 198 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || || || || || |||||||| || ||| | ||||| || || || | || || Sbjct 199 GATTCCTTCTTTATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCAC 258 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 |||||||||||||| || || |||| ||| || ||||| Sbjct 259 CTCGAGAGTGATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq3519 Length=1813 Score = 114 bits (126), Expect = 3e-20 Identities = 123/160 (77%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 |||||| ||||||||||| || | |||| ||||| ||||| || || || || ||||| | Sbjct 1654 TTCTTTCTGGATGTTGTAATCCGACAAG-GTGCGACCATCTTCCAGCTGCTTTCCGGCGA 1712 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 |||| | ||| ||||| || ||| || || ||||| || || |||||||| || ||| Sbjct 1713 AGATAAGACGCTGTTGATCTGGCGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACGT 1772 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 | ||||| || || || | || || |||||||||||||| Sbjct 1773 TCTCGATCGTATCGGATGGCTCCACCTCGAGAGTGATCGT 1812 >seq609 Length=4955 Score = 109 bits (120), Expect = 1e-18 Identities = 255/382 (67%), Gaps = 2/382 (1%) Strand=Plus/Plus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 ||| || ||||| || ||| ||||||| ||||| || | || |||| |||| ||| Sbjct 1816 CCAGGCCTCGACGTCCGAGCTGTACGGTAAGGTGGCTGAAACGCCACAAAACGAAAAGAC 1875 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAA 44102 ||||| ||||| || ||||||| | |||||| | || | || ||||| | Sbjct 1876 ACCGTTCTATCCGCGTTCGCCATATGCTTGCGCGAAGATGTACGGATACTGGATCGTGAT 1935 Query 44103 AAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAG 44162 ||| || |||||| | || | ||||||| || || |||| ||||| ||||| Sbjct 1936 AAACTACCGCGAGGCCTACGATATGTTCGCCTGCAACGGGATTCTATTCAACCACGAGTC 1995 Query 44163 TCCCAACAGAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATATTTT 44222 || | | || | | || ||||| || || ||||| |||| ||||| || | Sbjct 1996 ACCGCGCCGGGGAGAGAATTTTGTGACACGAAAGATCACTCGTTCGGTGGCGAAAATCT- 2054 Query 44223 CAACGGGACAGAAA-AATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGAT 44281 || || ||| ||||| | | |||| || | ||||| || |||| ||||| Sbjct 2055 CACTCGGCCAGCTGGAATGCCTTGAATTAGGTAATCTCGACTCAAAGCGAGACTGGGGCC 2114 Query 44282 ATGCCTTGGATTATGTAGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGACGACT 44341 | ||| || || || |||||||||||||||||| |||| || || | | | || || | Sbjct 2115 ACGCCAAAGACTACGTGGAAGCCATGTGGCTGATGATGCAGCAGGAGAAGCCGGAGGATT 2174 Query 44342 ACGTTATTGCAACTGGAAAGAC 44363 |||||| || || ||| |||| Sbjct 2175 TCGTTATCGCCACCGGAGAGAC 2196 >seq41025 Length=2165 Score = 100 bits (110), Expect = 6e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282966 AAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACG 283025 ||||| | ||| ||||| || || || || ||||| || || |||||||| || ||| Sbjct 2 AAGATAAGACGCTGTTGATCTGGTGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACG 61 Query 283026 GTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTA 283085 | ||||| || || || | ||| || ||||||||||||||||| || |||| ||| || Sbjct 62 TTCTCGATCGTATCGGATGGTTCCACCTCGAGAGTGATCGTCTTTCCGGTCAGAGTTTTG 121 Query 283086 ACGAATATCTGCATTTTCAT 283105 ||||| || ||||| || || Sbjct 122 ACGAAGATTTGCATGTTGAT 141 >seq3179 Length=6791 Score = 100 bits (110), Expect = 6e-16 Identities = 183/268 (68%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 273778 TCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACT 273837 ||||||| |||||||| | || || ||| || || || || | | |||||||| Sbjct 3688 TCGTGAAGATGTACCTCGGGCTAGCGCTGTCTTTTCCTCCCGTAAGACGTGTACCAAACT 3747 Query 273838 GACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCA 273897 |||| | || ||| || ||||||||||| ||||| || | ||| |||| ||| | Sbjct 3748 GACCACCCGGATAAAGCAGATTAATGTTGTTGCTTCCGACATAGTTCTGTGCCAAATTGA 3807 Query 273898 CGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAAC 273957 ||| ||| ||||| | ||| ||||||||||||||| || |||| ||| Sbjct 3808 TGATCGTCGAGCACAGGGACATCTCACCGTGGTGATAGGCGGACATCTCCGCGACTGAAC 3867 Query 273958 CACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAACA 274017 | | |||||| |||||||| |||| | | ||| |||||||| | | |||| | Sbjct 3868 CGGACAGCTGAGCCACCTTCACCTCGCGCTTGTCGTTACGCTTGAAGCACGTAAACAATA 3927 Query 274018 CCTTCCGCTGCGAGGGCTTGAACCCATC 274045 | |||||||| |||||| || || || Sbjct 3928 CTTTCCGCTGACCGGGCTTCAAGCCGTC 3955 >seq47782 Length=2481 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 303 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 359 >seq40584 Length=798 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 129 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 73 >seq36132 Length=822 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 640 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 696 >seq17875 Length=5618 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1393 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1449 >seq7860 Length=3702 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 2705 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 2649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046054577609392