Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq885 91.5 2e-13 >seq885 Length=6935 Score = 91.5 bits (100), Expect = 2e-13 Identities = 194/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 |||||| | || || |||||||| ||||| || || ||||| | ||| | | || || Sbjct 5190 AAACAACCTTCGCACATTAGCTTCAGATTCGCCGACGTATTTATCTAAAATCTGTGGGCC 5131 Query 156224 GTTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTGAGCGATACAGCGAGCCATTAA 156280 || || ||||| ||| ||| || ||||| | || | || || ||||| | Sbjct 5130 ATTTACAATTTT--CGGTTCGCGAGCATTTAACATGGTGC-CAATTTGACGGGCCATCAG 5074 Query 156281 TGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAA 156340 ||||||||| ||||||||||| || | || || |||||| | ||| |||||||| | Sbjct 5073 TGTTTTACCAGTTCCAGGAGGTCCATAAAGCAGTATTCCTTTCACATGCTTACAACCCAG 5014 Query 156341 TTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGA 156400 | |||| | ||| |||| | | ||||||||||||| || || ||| | Sbjct 5013 CTGTTCAACAACTTCCGGAGGAAATACACGAGAAGCAAATGCTCGCCGGAAGATGGCATT 4954 Query 156401 AAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 |||||| |||||| || || | |||||| | |||| ||||| Sbjct 4953 AAATTCGCGATCCAAGCCACCAATTCCCATTCTTCCGAAATCCCAAT 4907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666649539314880