Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq15712 100 6e-16 seq136 95.1 3e-14 seq18799 91.5 3e-13 seq19205 89.7 1e-12 seq19123 89.7 1e-12 seq18992 89.7 1e-12 seq18984 89.7 1e-12 seq18801 89.7 1e-12 seq18798 89.7 1e-12 seq15985 89.7 1e-12 seq15633 86.0 1e-11 >seq15712 Length=12775 Score = 100 bits (110), Expect = 6e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 281740 TCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACT 281799 |||||||||| ||||| | || ||| || || |||||| || || || ||||||| Sbjct 3386 TCGTGAAGATGTACCTAGGGCTGGCGCTATCCTTGCCACCCGTCAACCGCGTACCAAACT 3445 Query 281800 GACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGA 281859 |||| |||| ||| | ||| ||||| ||||| |||||||| | ||| |||||||||| Sbjct 3446 GACCGCCCGGATACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGA 3505 Query 281860 CGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAAC 281919 ||| ||| ||||| ||| ||||| || || ||| ||| || || ||| Sbjct 3506 TGATCGTCGAGCAGAGCGACTGCTCGCCGTGATGGTAAGCGGACATTTCCGCCACCGAAC 3565 Query 281920 CACTGAACTGTGCTACCTTCACGTC 281944 | ||||| || |||||||| || Sbjct 3566 CCGCCAACTGGGCCACCTTCACCTC 3590 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 282633 GCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCGACCG 282692 || ||||| |||||||||| ||||||||| || ||||| ||||| || | ||||||||| Sbjct 4327 GCTTCGCGCACGTTCAGCAGCTTACCGCGCAGCGGAAACACACCGTACGTGTCGCGACCG 4386 Query 282693 ACCACGGACAGTCCTGCAATTGCAAGTGTTGCTGCGGAATCTCCCTCCGTCAAGATGAGA 282752 ||||| ||| || | | || | ||| || || |||||||| |||| |||||| Sbjct 4387 ACCACCCCCAGCCCCGACACGGCCAACGTTTTGGCCGAGTCTCCCTCGGTCAGGATGAGC 4446 Query 282753 GTACA 282757 ||||| Sbjct 4447 GTACA 4451 >seq136 Length=3622 Score = 95.1 bits (104), Expect = 3e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 |||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 2691 CTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 2750 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 2751 AGCCCCACGTTGGGC 2765 >seq18799 Length=10264 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 73 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 14 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 13 CCCCACGTTGGGC 1 >seq19205 Length=6244 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 5061 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5002 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5001 CCCACGTTGGGC 4990 >seq19123 Length=4050 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 2432 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2373 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2372 CCCACGTTGGGC 2361 >seq18992 Length=5473 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 257 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 316 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 317 CCCACGTTGGGC 328 >seq18984 Length=2147 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 2085 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2026 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2025 CCCACGTTGGGC 2014 >seq18801 Length=4868 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 72 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 12 CCCACGTTGGGC 1 >seq18798 Length=5268 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 72 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 12 CCCACGTTGGGC 1 >seq15985 Length=39946 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 10910 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 10969 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 10970 CCCACGTTGGGC 10981 >seq15633 Length=23244 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || ||||| ||||||||||||||||||| | ||| ||||||| ||||||||||||| Sbjct 4717 CTAGCCCGGCTAGCTCAGTCGGTAGAGCATGACACTCTTAATCTCAGGGTCGTGGGTTCG 4776 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 4777 AGCCCCACGTTGGGC 4791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057542442291620