Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq17361 170 2e-37 >seq17361 Length=8649 Score = 170 bits (188), Expect = 2e-37 Identities = 407/613 (66%), Gaps = 2/613 (0%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGACGTA 16856 |||||| || || || || || || |||| | |||||||||||| || | | | || | Sbjct 537 ATCCGCGACGAACTCGATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGCATGTCG-A 595 Query 16857 CCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAG 16916 |||| || || | || | || ||||| || || ||||| || || || | Sbjct 596 CCGGCAGCGCCTTGGTGAGGAACTCCTGCTCGATCACGACCGCATCGCGGATGATCTCCG 655 Query 16917 CAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGC 16976 || || |||| |||||| | || |||| |||||||| || || || || | Sbjct 656 TCACGCGCTCCTTAGACGGTTTCTGCACCAGATACCGGAACATCAGGCAGGCAAAGTCAC 715 Query 16977 AATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTC 17036 | || | ||||||||| | ||| || ||||| || || |||| ||| ||||| | Sbjct 716 AGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTGGAGAACGTCAGCCCCGGCATTAGGC 775 Query 17037 CTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096 | || ||||| | ||| || || || || || ||| ||||| || ||||| |||| Sbjct 776 CGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCACTGAAGAAAATGCCCTCAACGG 835 Query 17097 ATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCA 17156 || || || | | || || || | | || | ||| | ||||| ||| || Sbjct 836 CAGCGAAGGCAACCACACGCTCCCCGAAGTTGGCCTTCTTGCTGGAGATCCAGTTCAGCG 895 Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTT 17216 |||| ||||| || | ||| | ||| | |||||| || || || || | | ||| Sbjct 896 CCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTTCGATCGCGTTGAACAGATACTCCC 955 Query 17217 TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276 || | ||||| ||| ||||| ||||| || || ||||||||| ||| | || Sbjct 956 GCTCGTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCACTGTGCACGT 1015 Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT 17336 ||||||| || |||||||| ||||| ||||| ||||| |||| | || || ||| | Sbjct 1016 TCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTGCACCTCCTGGC 1075 Query 17337 AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA 17396 ||| || ||| | ||||| ||||| ||||| ||||| |||||||| || || | || Sbjct 1076 TGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGAGGCGGCGAAGAAGGCAAGTA 1135 Query 17397 TATGCTTAATGAA 17409 ||| ||||| Sbjct 1136 CGTGCGAGATGAA 1148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517411206346320