Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq4838 141 7e-29 >seq4838 Length=6282 Score = 141 bits (156), Expect = 7e-29 Identities = 239/343 (70%), Gaps = 10/343 (3%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT---- 20273 || |||||||| |||||||| || ||||||||| |||| ||||| || |||| Sbjct 811 GGTGATTTGGGGCCTGTGTACGGTTTTCAATGGCGACACTTTGGGGCAAAATACAAAACG 752 Query 20274 TGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 || ||||| | ||| ||| ||||| |||| ||| | | | || || | Sbjct 751 TGCCATGACGA----TTACACTGGGCAAGGCATAGACCAACTTGCAGAGGTAATCGACAA 696 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 ||||||| ||||| |||| | |||| || | |||||||||| | | ||| | Sbjct 695 GATTAAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGACCGATAT 636 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATG 20452 || |||||| | || || |||||| |||| || ||||||| |||| ||| | Sbjct 635 CCCCAATATGGCTCTTCCACCTTGTCAT-TGCTTGGCTCAATTTTTTGTTGATAACGGAG 577 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 |||| || || || |||||||||||||| || || |||| ||||||| || ||||| | Sbjct 576 AATTATCATGCCAGATGTATCAACGATCGGCCGACGTGGGCTTGGGTGTACCATTCAACA 517 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 | ||||| || |||||||||| ||||||| || ||||| || Sbjct 516 TCGCAAGCTACTCGCTGCTTACCCATATGATCGCGCATGTCAC 474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399082933347430