Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3577 387 2e-102 >seq3577 Length=7701 Score = 387 bits (428), Expect = 2e-102 Identities = 1203/1851 (65%), Gaps = 26/1851 (1%) Strand=Plus/Plus Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126 || || ||||| || | ||||||||| || || || | ||| | |||| ||| ||| Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 5791 Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186 || || || ||||| || | || || || | || || || | ||||| Sbjct 5792 TGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 5851 Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCC 62246 || |||||||| ||||| | || || ||||||| ||| ||| || | ||| ||| Sbjct 5852 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTGACCGAAATCTCC 5911 Query 62247 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATGGA 62302 |||| ||||| || | |||| | ||| ||| | || | ||||| || || Sbjct 5912 CAAACCGTTTTGTACAGATCGCGCACGTCCTT-TGGTATTTTCTCAATCTTCTGGATCGA 5970 Query 62303 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362 ||| | ||| || | ||||| || ||||| | ||| | | |||| | Sbjct 5971 TCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTCAG 6030 Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422 | | | ||||| |||| || || || || || || || | |||| || |||| Sbjct 6031 GTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTA 6090 Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62482 | || || ||||| || | ||||| || || ||||| ||||||||||| || || Sbjct 6091 GACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGC 6150 Query 62483 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62542 || ||||| ||||| | || | || | || || | | || ||| || || || Sbjct 6151 TGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTT 6210 Query 62543 TAGATGTT-CCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAA 62601 | ||| |||||||||| || |||| |||| | || || |||| Sbjct 6211 CA-ATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAA 6269 Query 62602 TACCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGT 62660 | || || || | | || | ||| | || || || || || || ||||| | || | | Sbjct 6270 TGCCCTTGCTTACCGGACAA-CCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAAT 6328 Query 62661 TTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCT 62720 | || || || || || || || || || ||||||||||| || | || ||| || | | Sbjct 6329 TCGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTT 6388 Query 62721 TGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGA 62780 || |||| | || || | ||| | | | ||| ||||| || || | || || Sbjct 6389 TGCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGG 6448 Query 62781 ACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAA 62840 ||||| || ||||| || | || | | | || ||| || ||||| || | || || Sbjct 6449 ACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAG 6508 Query 62841 TAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTC 62897 || || | || || || || || ||||| | | || || ||| | || |||||| Sbjct 6509 TAGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATC---TTGGCGACCTCCTTC 6565 Query 62898 AGTTTGAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAATGCAACAGATGCC 62954 || || ||||| | | ||| |||||||||||||| |||| || ||| Sbjct 6566 AGCTTCTTGAAATCGTACGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCC 6625 Query 62955 AGATTACACACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGAT 63012 | ||| |||||||| || || | | || || || | | ||||||||||||||| | Sbjct 6626 AAATTGCACACGGCCACTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGT 6683 Query 63013 TACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 63072 | ||||||||| || || | ||||| || || || || || ||||||||||| | Sbjct 6684 TCGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGT 6743 Query 63073 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 63132 | || ||| | || || ||||| | ||| || || || ||||| ||| | || Sbjct 6744 ACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTT 6803 Query 63133 GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGA 63192 | ||||| | | | | | | | | ||| ||||| || |||| |||| Sbjct 6804 GCGCCTTCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGA 6863 Query 63193 ACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACT 63252 |||| || ||||| || | |||||| ||||| || | ||| |||||||| |||| Sbjct 6864 ACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACA 6923 Query 63253 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 63312 | | | ||| ||| || ||||| || ||||| || ||||| ||||| || | | Sbjct 6924 TTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGT 6983 Query 63313 CTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 63372 | | | | | ||||| || || || || || || ||||| || ||| | | | || Sbjct 6984 CGCGAGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACAT 7043 Query 63373 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 63432 || ||||||||||| | ||| || || | | || ||||| || || || ||||||| Sbjct 7044 CACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGAT 7103 Query 63433 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATAC 63492 | | ||| | || ||||| || || || | | ||| || | | ||||| || |||| Sbjct 7104 CAACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATAC 7163 Query 63493 CATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCTAT 63550 | || ||||||||||| || ||| | ||||| || | | | ||| | | || || Sbjct 7164 CGTTCGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GCCCGAT 7221 Query 63551 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTAT 63610 || || ||| ||| ||||| |||||||| | || || || || ||||| || || || Sbjct 7222 ACCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGAT 7281 Query 63611 GCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGC 63670 |||||| || ||| | || ||||| || || | || |||| || |||| Sbjct 7282 GCTATCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGC 7341 Query 63671 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC 63730 ||| | ||| ||||| ||||| ||||| | || ||||| |||||||||||||| Sbjct 7342 CGCAAACATGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTC 7401 Query 63731 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63790 || |||| || || ||| || || || | ||||||||||| ||||| ||||| Sbjct 7402 GATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTG 7461 Query 63791 AGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63850 || || || ||||| || ||||| |||||||| || ||| |||| |||||||| Sbjct 7462 CGGCCTCTCCACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAA 7521 Query 63851 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901 ||| |||||||| || |||||| || |||||||| || ||||||| || Sbjct 7522 ACCGAAATAGTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629654052114720