Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3577 387 2e-102 seq17361 131 2e-25 >seq3577 Length=7701 Score = 387 bits (428), Expect = 2e-102 Identities = 1200/1850 (65%), Gaps = 24/1850 (1%) Strand=Plus/Plus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919 || || ||||| || | ||||||||| || || || | ||| | |||| ||| ||| Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 5791 Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979 || || || ||||| || | || || || | || || || | ||||| Sbjct 5792 TGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 5851 Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 65039 || |||||||| ||||| | || || ||||||| ||| ||| || | ||| ||| Sbjct 5852 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTGACCGAAATCTCC 5911 Query 65040 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATGGA 65095 |||| ||||| || | |||| | ||| ||| | || | ||||| || || Sbjct 5912 CAAACCGTTTTGTACAGATCGCGCACGTCCTT-TGGTATTTTCTCAATCTTCTGGATCGA 5970 Query 65096 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 65155 ||| | |||| || | ||||| || ||||| | ||| | | |||| | Sbjct 5971 TCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTCAG 6030 Query 65156 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 65215 | | | ||||| | || || || ||||| || || || | |||| || |||| Sbjct 6031 GTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTA 6090 Query 65216 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 65275 | || || ||||| || | |||||| || || ||||| ||||||||||| || || Sbjct 6091 GACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGC 6150 Query 65276 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 65335 || ||||| ||||| | || | || | || || | | || ||| || || || Sbjct 6151 TGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTT 6210 Query 65336 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNnnnnnnnNNNTTGTAGAAT 65395 | | |||||||||| || |||| |||| | || ||||| Sbjct 6211 CAATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAAT 6270 Query 65396 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 65454 || || || | | || | ||| | || || ||||| || || ||||| | || | || Sbjct 6271 GCCCTTGCTTACCGGACAA-CCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATT 6329 Query 65455 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 65514 | || || || || || || || || || |||||||| || || | || ||| || | || Sbjct 6330 CGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTT 6389 Query 65515 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 65574 | |||| | || || | ||| | | | ||| ||||| || || | || || | Sbjct 6390 GCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGA 6449 Query 65575 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 65634 |||| || ||||| || | || | | | || ||| || ||||| || | || || | Sbjct 6450 CACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGT 6509 Query 65635 AATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCA 65691 | || | || || || || || ||||| | | || || ||| | || ||||||| Sbjct 6510 AGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATC---TTGGCGACCTCCTTCA 6566 Query 65692 GTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAACAGATGCCA 65748 | || ||||| | || || |||||||||||||| |||| || |||| Sbjct 6567 GCTTCTTGAAATCGTACGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCA 6626 Query 65749 GATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATT 65806 ||| || ||||| || || | | || || || | | ||||||||||||||| || Sbjct 6627 AATTGCACACGGCCACTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTT 6684 Query 65807 ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 65866 |||||||||||| || | ||||| || || || || || ||||||||||| || Sbjct 6685 CGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTA 6744 Query 65867 AAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCG 65926 || ||| | || || ||||| | ||| || || || ||||| ||| | || | Sbjct 6745 CAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTG 6804 Query 65927 AGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAA 65986 ||||| | | | | | | | ||| ||||| || |||| ||||| Sbjct 6805 CGCCTTCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAA 6864 Query 65987 CTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTC 66046 ||| || ||||| || | ||||||| ||||| || | ||| |||||||| |||| Sbjct 6865 CTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACAT 6924 Query 66047 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATC 66106 | | | ||| ||| || ||||| || ||||| || ||||| ||||| || | || Sbjct 6925 TTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTC 6984 Query 66107 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 66166 | | | | ||||| || || || || || || ||||| || ||| | | | ||| Sbjct 6985 GCGAGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATC 7044 Query 66167 ATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 66226 | ||||||||||| | ||| || || | | || ||||| || || || |||||||| Sbjct 7045 ACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATC 7104 Query 66227 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 66286 | ||| | || ||||| || || || | | ||| || | | || || || |||| Sbjct 7105 AACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACC 7164 Query 66287 ATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATT 66344 || || |||||||| || |||| | ||||| || | | | ||| | | || || Sbjct 7165 GTTCGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GCCCGATA 7222 Query 66345 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 66404 || || ||| ||| ||||| |||||||| | || || ||||| ||||| || || || Sbjct 7223 CCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATG 7282 Query 66405 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 66464 ||||| ||| ||| | || ||||| || || | || |||| || |||| Sbjct 7283 CTATCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCC 7342 Query 66465 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCA 66524 ||| | ||| ||||| ||||| ||||| | || ||||| |||||||||||||| Sbjct 7343 GCAAACATGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCG 7402 Query 66525 ATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 66584 || |||| || || ||| || || || | ||||||||||| ||||| ||||| Sbjct 7403 ATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGC 7462 Query 66585 GGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 66644 || || || || ||||| ||||| |||||||| || ||| |||| ||||||||| Sbjct 7463 GGCCTCTCCACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAA 7522 Query 66645 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 || |||||||| || |||||| || |||||||| || |||| || || Sbjct 7523 CCGAAATAGTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 >seq17361 Length=8649 Score = 131 bits (144), Expect = 2e-25 Identities = 358/546 (66%), Gaps = 7/546 (1%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 ||||||| || || || || ||||| || |||||||| | || | |||||||| Sbjct 694 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTGGAG 753 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 ||||| || || ||||||||||| ||||| || ||||| || || | |||||| ||| Sbjct 754 AACGTCAGCCCCGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCA 813 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328 |||||||| || || || || || ||||||| | | ||| || | ||| || Sbjct 814 CTGAAGAAAATGCCCTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAAGTTGGC-CT- 871 Query 36329 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 36383 || || ||||| || | ||||| ||||||||||| || || || || | || | Sbjct 872 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTT 931 Query 36384 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443 | || || || || ||||| | || || || | || || || |||| | Sbjct 932 CGATCGCGTTGAACAGATACTCCCGCTCGTTCGGGTCGCGTATGTACGTGTCGATCAGCA 991 Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503 | |||||||| || | ||| || || || || ||||| |||||||| || | | Sbjct 992 GCGAGTACATTTCACTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 1051 Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 36563 |||| || | ||| || || | || || || | | ||| || || || || |||| Sbjct 1052 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 1111 Query 36564 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTT 36623 | ||| || || || || | ||| || || || | ||| | ||| | || Sbjct 1112 CCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGTTTGAGCG 1171 Query 36624 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683 | ||| || || || || || || | ||||| |||||||||||||| || || || | Sbjct 1172 ATTCCCAGTCTTTCATGTCCTTCGACAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTT 1231 Query 36684 CTGCCT 36689 | |||| Sbjct 1232 CCGCCT 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658001888978160