Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3577 376 4e-99 seq17361 167 3e-36 >seq3577 Length=7701 Score = 376 bits (416), Expect = 4e-99 Identities = 1017/1542 (66%), Gaps = 23/1542 (1%) Strand=Plus/Plus Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104 ||||| | || || || ||||| || || || | |||| || |||| | || Sbjct 6041 AGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGAC 6100 Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATA 79164 || || || || | || || || || ||||| ||||||||||| || || |||||||| Sbjct 6101 GTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTGGCATC 6160 Query 79165 GGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCC 79224 ||||| | || | || | || || | | | ||| || || || | | || Sbjct 6161 GGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTTCAATGCCGCC 6220 Query 79225 CAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT- 79283 |||| ||| || || | ||| | ||||| | || || || ||||| || || || Sbjct 6221 CAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTT 6280 Query 79284 AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGC 79343 | || | | ||| ||| || || || || || ||||| |||| ||||| || || || Sbjct 6281 ACCGGACAA-CCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCGCAGCTAGC 6339 Query 79344 CTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAG 79403 || || || || || || |||||||| || || | || |||||| | ||| |||| Sbjct 6340 TTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTTGCGCTTGCTC 6399 Query 79404 GCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACC 79463 || || | ||| | | | ||| ||||| || || | || || ||||| || || Sbjct 6400 ACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCC 6459 Query 79464 GATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATC 79523 ||| || | || | | | || || || ||||| || | || || || || | || Sbjct 6460 GATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGTAGTTCACGTC 6519 Query 79524 TATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC 79583 || || || || ||||| | || | ||| | || ||||| || || ||||| Sbjct 6520 AATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTCAGCTTCTTGAAATC 6579 Query 79584 AAATCGTCC-ATCTATT---ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGG 79639 | ||| | ||| ||||||||||||||||| | || |||| ||| || |||| Sbjct 6580 GTA-CGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCAAATTGCACACGG 6638 Query 79640 CTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAAT 79697 | || || | | || || || | | ||| |||||||| ||||| |||||| || Sbjct 6639 CCACTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTTCGAACACTTGAT 6696 Query 79698 GGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGG 79757 ||| || | ||||| || || || || || ||||||||||| || || ||| |||| Sbjct 6697 GGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTACGG 6756 Query 79758 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTAT 79817 || ||||| | ||| || || || ||||| ||| | || | ||||| | | Sbjct 6757 TACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTGCGCCTTCACTT- 6815 Query 79818 AGACTTGTATCTCTTTTCTCTT--TCGTATT--GTGTATATAATCGTTCGAACTCGTCTC 79873 ||| | || | |||| ||||| ||||| | || |||||||| || | Sbjct 6816 -GACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTC--TCGAACTCTTCGC 6872 Query 79874 CCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCAT 79933 |||| |||| | ||||| ||||| |||| || |||||||| |||| | ||| Sbjct 6873 CCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTCATTCG 6932 Query 79934 CCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 79993 ||| || || ||||| || ||||| || ||||| ||||| || | || | | | Sbjct 6933 CCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCGAGCGC 6992 Query 79994 TATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 80053 | |||||| || || || || || || ||||| || ||| | | | |||| |||| Sbjct 6993 GAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCGTGCC 7052 Query 80054 ACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATC 80113 ||||||| | ||| || || | | || || || || || || |||||||| | ||| | Sbjct 7053 ACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGTACC 7112 Query 80114 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCC 80173 || ||||| || || || | | ||| || | | || || || |||| || || | Sbjct 7113 GTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCGTAC 7172 Query 80174 CGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGC 80231 ||||||| || |||| | ||||| || | | | ||| | | || || || || || Sbjct 7173 CGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GCCCGATACCACCGGC 7230 Query 80232 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATC 80291 | ||| ||||| |||||||| | || || ||||| ||||| || || |||||||| || Sbjct 7231 CGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATGCTATCGTC 7290 Query 80292 AATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 80351 ||| | || ||||| || || | || |||| || |||| ||| | Sbjct 7291 CGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCAAACAT 7350 Query 80352 GGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGA 80411 ||| ||||| ||||| ||||| | || || || |||||||||||||| || |||| Sbjct 7351 GGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATCGCTGC 7410 Query 80412 TTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTC 80471 || || ||| || || || | ||||||||||| ||||| ||||| || || || Sbjct 7411 CTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGCGGCCTCTC 7470 Query 80472 AACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATA 80531 || ||||| ||||| |||||||| || ||| |||| ||||||||||| ||||| Sbjct 7471 CACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAACCGAAATA 7530 Query 80532 GTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 ||| || |||||| || |||||||| || |||| || || Sbjct 7531 GTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 >seq17361 Length=8649 Score = 167 bits (184), Expect = 3e-36 Identities = 366/546 (67%), Gaps = 7/546 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 ||||||| || || || || |||||||| |||||||| | || || |||||||| Sbjct 694 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTGGAG 753 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 ||||| || || ||||||||||| ||||| || ||||| || || | |||||| ||| Sbjct 754 AACGTCAGCCCCGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCA 813 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 ||||| || || || || || || |||||||| | | ||| || | |||| || Sbjct 814 CTGAAGAAAATGCCCTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAAGTTGGC-CT- 871 Query 50131 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 || || ||||| || | ||||| ||||||||||| || || || || | ||||| Sbjct 872 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTT 931 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || || || || ||||| | || || || | || || ||||||| | Sbjct 932 CGATCGCGTTGAACAGATACTCCCGCTCGTTCGGGTCGCGTATGTACGTGTCGATCAGCA 991 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | |||||||| || | ||| || || || |||||||| |||||||| || | | Sbjct 992 GCGAGTACATTTCACTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 1051 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365 |||| || | |||||| || | || || || | | ||| || || || || |||| Sbjct 1052 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 1111 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT 50425 | ||| || || || || | ||| || || || || ||| | ||| | || Sbjct 1112 CCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGTTTGAGCG 1171 Query 50426 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | ||| || || || || || || | || || |||||||||||||| || || || | Sbjct 1172 ATTCCCAGTCTTTCATGTCCTTCGACAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTT 1231 Query 50486 CTGCCT 50491 | |||| Sbjct 1232 CCGCCT 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718082283549360