Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3577 378 1e-99 seq17361 152 7e-32 >seq3577 Length=7701 Score = 378 bits (418), Expect = 1e-99 Identities = 1199/1850 (65%), Gaps = 27/1850 (1%) Strand=Plus/Plus Query 70823 CGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAAT 70882 |||||| ||| || | |||||||||||| || || | ||| | |||| ||| ||| | Sbjct 5734 CGGCTT-CGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAGT 5792 Query 70883 GCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTT 70942 | || || ||||| ||| | || ||||| | ||| || || | ||| || | Sbjct 5793 GGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGACT 5852 Query 70943 GATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCC 71002 | |||||||| ||||| | || || ||||||| ||| ||| || | ||| |||| Sbjct 5853 GGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTGACCGAAATCTCCC 5912 Query 71003 AAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATGGAT 71058 ||| ||||| || | |||| | ||| ||| | || | ||||| || ||| Sbjct 5913 AAACCGTTTTGTACAGATCGCGCACGTCCTT-TGGTATTTTCTCAATCTTCTGGATCGAT 5971 Query 71059 CCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAA 71118 || | || | || | || || || || || | ||| | | |||| | Sbjct 5972 CCGTTGTGCGCCAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTCAGG 6031 Query 71119 ACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 71178 | | | |||||| | || || || ||||| || || || | |||| || |||| Sbjct 6032 TCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAG 6091 Query 71179 ATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCA 71238 | || || ||||| || | ||||| || || ||||| ||||||||||| || || Sbjct 6092 ACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGCT 6151 Query 71239 GTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTT 71298 || ||||| ||||| | || || || | || |||||| | ||| || || || Sbjct 6152 GTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTTC 6211 Query 71299 AGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATG 71358 | | |||||||||| || |||| ||| | ||| Sbjct 6212 AATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATG 6271 Query 71359 CCGTTACT-AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTC 71417 || || || | || | | ||| | || || ||||| || || || || |||| | ||| Sbjct 6272 CCCTTGCTTACCGGACAA-CCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTC 6330 Query 71418 ACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTG 71477 || || || || || || ||||| || |||||||| || || | || |||||| | ||| Sbjct 6331 GCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTTG 6390 Query 71478 TGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 71537 |||| | || || | ||| | | | ||| ||||| || || | || || || Sbjct 6391 CGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGAC 6450 Query 71538 GCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATA 71597 || || ||||| || | ||| | | | || || || ||||| || | || || || Sbjct 6451 ACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGTA 6510 Query 71598 ATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTT 71657 || | || || || || || ||||| | || | ||| | || ||||| || || Sbjct 6511 GTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTCAGCTT 6570 Query 71658 GAGAAAATCAAATCTCCCATCTATT---ACAAACACGTTCAAGGCAACAGATGCCAGATT 71714 ||||| | | | ||| ||||||| |||||| |||| || |||| ||| Sbjct 6571 CTTGAAATCGTACGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCAAATT 6630 Query 71715 ACAAACGGCTACCTCATTAGCATCGGCA--TATTGTATAATTTCAGTGCAAAGATTACTA 71772 || ||||| || || | | ||| | || | | || ||||||||||| || | Sbjct 6631 GCACACGGCCACTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTTCGAA 6688 Query 71773 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 71832 ||||||||||| || | ||||| || || || || || ||||||||||| || || Sbjct 6689 CACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGC 6748 Query 71833 ATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 71892 || |||| || ||||| | ||| || || || ||||| ||| | || | ||| Sbjct 6749 ATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTGCGCC 6808 Query 71893 TTTATTATATTCTTGTATCTCTTTTCTCTT--TCGTATT--GTGTATATAATCGTTCGAA 71948 || | | | | | || | |||| ||||| ||||| | || ||||| Sbjct 6809 TTCACTTGA--CGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTC--TCGAA 6864 Query 71949 CTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTC 72008 ||| || ||||| | || | | ||||| ||||| || | ||| |||||||| |||| Sbjct 6865 CTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACAT 6924 Query 72009 TCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 72068 | ||| | | || || ||||| || ||||| || ||||| ||||| || | || Sbjct 6925 TTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTC 6984 Query 72069 TCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 72128 | | | | |||||| || || || || || || ||||| || ||| | | | ||| Sbjct 6985 GCGAGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATC 7044 Query 72129 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATC 72188 | ||||||||||| | ||| || || | | || ||||| || || || |||||||| Sbjct 7045 ACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATC 7104 Query 72189 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACC 72248 | ||| | || ||||| || || || | | ||| || | | || || || ||| Sbjct 7105 AACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACC 7164 Query 72249 ATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATT 72306 || || |||||||| || |||| | ||||| || | ||| ||| | | || || Sbjct 7165 GTTCGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GCCCGATA 7222 Query 72307 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 72366 || || ||| ||| ||||| |||||||| | || || ||||| ||||| || || || Sbjct 7223 CCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATG 7282 Query 72367 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 72426 ||||| ||| ||| | || ||||| || || | || |||| || |||| Sbjct 7283 CTATCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCC 7342 Query 72427 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 72486 ||| | ||| ||||| ||||| ||||| | || || || |||||||||||||| Sbjct 7343 GCAAACATGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCG 7402 Query 72487 ATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGA 72546 || |||| || || ||| || || || | ||||||||||| ||||||||||| Sbjct 7403 ATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGC 7462 Query 72547 GGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 72606 || || || || ||||| ||||| |||||||| || ||| |||| ||||||||| Sbjct 7463 GGCCTCTCCACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAA 7522 Query 72607 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 || |||||||| || |||||| || |||||||| || ||||||| || Sbjct 7523 CCGAAATAGTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 >seq17361 Length=8649 Score = 152 bits (168), Expect = 7e-32 Identities = 365/547 (67%), Gaps = 9/547 (2%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 ||||||| || || || || |||||||| ||||| || | || | |||||||| Sbjct 694 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTGGAG 753 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 ||||| || || ||||||||||| ||||| || ||||| || |||| |||||| ||| Sbjct 754 AACGTCAGCCCCGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCA 813 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 ||||| || || || || || || ||||||| | | ||| || | ||| || Sbjct 814 CTGAAGAAAATGCCCTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAAGTTGGC-CT- 871 Query 42236 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 42290 || || ||||| || | ||||| ||||||||||| || || || || | ||||| Sbjct 872 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTT 931 Query 42291 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAA 42350 | || || || || ||||| | || || || | || || ||||||| | Sbjct 932 CGATCGCGTTGAACAGATACTCCCGCTCGTTCGGGTCGCGTATGTACGTGTCGATCAGCA 991 Query 42351 GACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGG 42410 | |||||||| || | ||| || || || |||||||| |||||||| || | || Sbjct 992 GCGAGTACATTTCACTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 1051 Query 42411 CCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGT 42470 |||| || ||||| || || | || || || | | ||| ||||| || || |||| Sbjct 1052 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 1111 Query 42471 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATT 42530 | ||| || || || || | ||| || || || | ||| |||| || | Sbjct 1112 CCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGT-TTGAGC 1170 Query 42531 TATT-CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589 ||| ||| || || || || || || | || || ||||| || ||||| || || ||| Sbjct 1171 GATTCCCAGTCTTTCATGTCCTTCGACAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCT 1230 Query 42590 TCTGCCT 42596 || |||| Sbjct 1231 TCCGCCT 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670964921928240