Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq5576 104 2e-17 >seq5576 Length=36905 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| || || || || || |||||||||| |||||||| ||||| |||||||| || Sbjct 18714 TCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTA 18655 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| || || | | ||| | |||||||| ||| || || |||| ||| | Sbjct 18654 TCCTGAATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGAGTGATG 18595 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||||||||| | |||||| ||||| || ||||| Sbjct 18594 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 18560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506882741035680