Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq17361 244 2e-59 seq3577 210 3e-49 seq15522 203 5e-47 seq953 163 4e-35 >seq17361 Length=8649 Score = 244 bits (270), Expect = 2e-59 Identities = 502/740 (68%), Gaps = 30/740 (4%) Strand=Plus/Minus Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097 |||| | || ||||| ||||| || |||||||| || ||||| |||||| || | || | Sbjct 1237 AGGCGGAAGCTTCCTTCTGGACAGTGGAAGAGGTGGACCTGTCGAAGGACATGAAAGACT 1178 Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGT----TTATATCGCACATTTTGGCCTTC 125153 |||| ||| || |||| ||||||| || | || |||||| | | |||||| Sbjct 1177 GGGAA--TCG-----CTCAAACCGAGCGAGCGTCACTTCATCTCGCACGTACTTGCCTTC 1125 Query 125154 TTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTG 125213 || |||| ||| || || ||||| ||||| |||||| || || ||| || ||| || Sbjct 1124 TTCGCCGCCTCGGACGGTATCGTAAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTG 1065 Query 125214 ACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCG 125273 | | |||| ||||| ||||| || || || ||| |||||||||||| Sbjct 1064 CAGGTGACGGAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGT 1005 Query 125274 GAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC---ACATG 125330 ||||||||||| ||||| |||| |||||| ||||| ||| |||| | | | Sbjct 1004 GAAATGTACTCGCTGCTGATCGACACGTACATACGCGACCCG-AACG--AGCGGGAGTAT 948 Query 125331 CTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGG 125390 || || ||||| ||||| ||| | |||| | || ||||| | |||| | | Sbjct 947 CTGTTCAACGCGATCGAAACGCTACCGTGCGTCAAGAAGAAGGCCGACTGGGCGCTGAAC 888 Query 125391 TGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAG 125450 |||||| | | ||| | | || || | |||| || ||||| ||||| ||| Sbjct 887 TGGATCTCCAGCAAGAAGGCCAACTTCGGGGAGCGTGTGGTTGCCTTCGCTGCCGTTGAG 828 Query 125451 GGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATG 125510 ||||| ||||| || || |||||||| ||||| ||||| ||||||||||| || ||| Sbjct 827 GGCATTTTCTTCAGTGGCAGCTTTGCGGCTATCTTCTGGCTGAAGAAGCGCGGCCTAATG 768 Query 125511 CCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTT 125570 || || |||||| | |||||| | || || || |||||||| || |||||||||||| Sbjct 767 CCGGGGCTGACGTTCTCCAACGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTT 708 Query 125571 GCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAG-ATCCAGCGATGAAAAG-G 125628 ||| || |||| || |||||| |||||| | || | | | | | | Sbjct 707 GCCTGCCTGATGTTCCG---GTATCTG--------GTGCAGAAACCGTCTAAGGAGCGCG 659 Query 125629 TCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTAC 125688 | | | || | |||||| || ||| || || ||||| || ||| | | || | Sbjct 658 TGACGGAGATCATCCGCGATGCGGTCGTGATCGAGCAGGAGTTCCTCACCAAGGCGCTGC 599 Query 125689 CGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAG 125748 ||||| |||| | |||||||||||| | || |||| ||||||| ||||| || || | Sbjct 598 CGGTCGACATGCTCGGCATGAACTGCGAACTGATGTCGCAGTACATCGAGTTCGTCGCGG 539 Query 125749 ATCGTCTACTGTACGAGTTG 125768 |||| | ||| |||||| Sbjct 538 ATCGGTTGCTGCTGGAGTTG 519 >seq3577 Length=7701 Score = 210 bits (232), Expect = 3e-49 Identities = 372/536 (69%), Gaps = 16/536 (3%) Strand=Plus/Minus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890 || || ||||| | ||||||| | | |||| |||||| |||||||| ||||| Sbjct 7146 GTACCGATGCTACGTGTGTACAACAACACGGCACGGTACGTTGATCAGGGCGGTAATAAG 7087 Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950 ||||||||||| | || ||||| | ||||| ||||||| || || ||||| ||| | Sbjct 7086 CGGCCAGGCGCGTTTGCTATCTACCTCGAACCGTGGCACGGTGATGTGTTTGAGTTTCTG 7027 Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010 || || |||||| | ||| || |||| || || | ||| |||| || || ||| Sbjct 7026 GATCTGAAGAAAAACACCGGCAAGGAGGAGGTTCGCGCTCGCGACATGTTCTACGCTCTC 6967 Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGC 97070 ||| | || ||| ||||||||||||| || | | || ||||| | |||||| Sbjct 6966 TGGATACCGGATCTGTTCATGAAGCGTGTGGAGGCGAATGAAATGTGGAGTTTGATGTGC 6907 Query 97071 CC---CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTAC 97127 || ||||| ||| |||| || |||||| |||||||||||||| ||| |||| Sbjct 6906 CCGCACGACT-GTC--CCGGATTGGCCGATTCGTGGGGCGAAGAGTTCGAGAAGCTGTAC 6850 Query 97128 ACGGCCTACGAGCAAGAGGGCCG----ATACGTGAGACGAGTCGATGCACGAGAACTGTG 97183 |||| |||||| |||| | || |||||| | ||| | || | ||| ||||| Sbjct 6849 ACGGGTTACGAGGCAGAGTGTCGGTTTATACGTCA----AGTGAAGGCGCAAGATCTGTG 6794 Query 97184 GAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATAC 97243 | || ||| | | | ||||| || || || |||||||| || ||||||||| | Sbjct 6793 GTTTGCGATCATCGAGTCACAGGTGGAAACGGGCGTACCGTACATGCTGTACAAGGATGC 6734 Query 97244 CGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCA 97302 ||| |||||||| |||||||| | || | |||||||||||| | || || || |||| Sbjct 6733 -GTGCAATCGCAAAAGCAACCAGCAAAACATCGGCACCATCAAGTGTTCGAACCTTTGCA 6675 Query 97303 CGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCG 97358 | || || || |||||| | || |||||| ||| || ||| | |||| ||| Sbjct 6674 CTGAGATAGTGGAGTACTCGTCGAAGGACGAAGTGGCCGTGTGCAATTTGGCCTCG 6619 Score = 147 bits (162), Expect = 3e-30 Identities = 321/478 (67%), Gaps = 2/478 (0%) Strand=Plus/Minus Query 97785 AACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTTGGCAATGCT 97844 ||||| ||||| | ||||||||||| || ||| | ||| | ||| | || ||||| Sbjct 6180 AACTCACTGCTGCTAGCACCGATGCCAACAGCTTCGACTGCTCAAATATTGGGCAACAAC 6121 Query 97845 GAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCTGGAGAGTTT 97904 || ||||| || |||| |||||| ||| | ||| | |||| | || || |||||| Sbjct 6120 GAGTCTTTCGAGCCGTACACGTCGAACGTCTACAACCGACGAGTGCTTTCGGGCGAGTTT 6061 Query 97905 CAATTGACCAACGTGCACTTGGTTCGAGACTTGGAACG-GCTCAATCTGTGGAACGATGA 97963 || | ||| || || | ||| || | || || | |||||| ||||||| Sbjct 6060 CAGGTTGTGAACCATCATCTGATCAAGGACCTG-ACCGCGCACGGGCTGTGGGACGATGA 6002 Query 97964 CATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTACCATCATCCCGGA 98023 ||| | ||| || |||| || || || || || ||| | || || | Sbjct 6001 AATGAAGAACACAATCCTGGCGCACAACGGATCGATCCAGAAGATTGAGAAAATACCAAA 5942 Query 98024 AGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATAT 98083 || ||||| | ||||| || || ||||||||| || ||| ||| ||| | || Sbjct 5941 GGACGTGCGCGATCTGTACAAAACGGTTTGGGAGATTTCGGTCAAAACGTGCATCCAAAT 5882 Query 98084 GGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGA 98143 ||| ||||| | || | | ||| |||||| ||||||||||| | |||| ||||| Sbjct 5881 GGCGGCCGATCGTGGAGCGTTCATCGACCAGTCCCAATCGTTCAACATACACGTGGCCGA 5822 Query 98144 GCCCACCTACAGTCGTATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGAC 98203 |||| |||| || | || ||||| |||||| |||| ||||| | ||| | ||||| Sbjct 5821 ACCCAACTACGGTAAACTTACCTCGATCCACTTTCACGCGTGGAAGATGGGTTTGAAGAC 5762 Query 98204 GGGCATGTACTATCTGAGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 |||||||||||| || | || ||| ||||| ||||| || | || ||||| ||| Sbjct 5761 TGGCATGTACTATTTGCGCACGAAGCCGGCCGTAAATGCGATCCAGTTCACGGTCGAC 5704 >seq15522 Length=34887 Score = 203 bits (224), Expect = 5e-47 Identities = 614/946 (65%), Gaps = 72/946 (8%) Strand=Plus/Plus Query 126677 CACGATCAATGTAGTCTACGATGCGTTCAATGTCACACTCTTTGACA---CCACGGGTCG 126733 |||| || |||||||| || | || | || || ||| |||| || || |||| Sbjct 14198 CACGGTCGATGTAGTCCACCACCCGCGCCATATCCTTCTC---GACAAGCCCGCGAGTCG 14254 Query 126734 TCACCGCAGGAGTACCGAGTCTGATGCCGCTTGGTCTGAGAGCGCTCTTGTCTCCGGGTA 126793 | | ||| || || ||||| | |||||| || | || ||| ||| || || || | Sbjct 14255 TAAGCGCCGGCGTGCCGAGCCGAATGCCGGACGGGTTCAGTGCGGACTTATCGCCCGGGA 14314 Query 126794 CTGTGTTTTTGTTGCAAGCGATTCTGCACAGTTCGAGGATGCGCTCTGCCGGTGCTCCTG 126853 | |||||||||||||| ||||| | | || |||||| || || | || || | Sbjct 14315 CCGTGTTTTTGTTGCATGCGATCGAGATCTCCTCCAGGATGTATTCGGCGCGCGCCCCAG 14374 Query 126854 CGAGTCCCACACTGCGCAAATCCACTAGAATCAGATGCACATCGGTACCGCCAGTGGTGA 126913 | || || ||||| ||| || || | ||||||||| ||||||||||| || | | Sbjct 14375 TAATACCGACCGGGCGCAGATCGACCAGCACCAGATGCACGTCGGTACCGCCCGTCGCCA 14434 Query 126914 CGGTGTAGCCTCGTGAAACGAGTCCCTCTGCCAACA----ACTGTGCATTTCGCACCACT 126969 | | ||||||| | || || || || ||| || | ||||| |||||||| Sbjct 14435 CTGAGTAGCCTTTCTCGAGCAGACCATC-GC--ACAGTGCAC-GCGCATTGCGCACCACC 14490 Query 126970 CGTCTTTGGTAGAGTGCA-AACTCTAGAGTGGTGGCCTGGTGCATTGCGGTGGCGATCGC 127028 | ||||| | || || ||| |||| |||||| |||| ||||| || | Sbjct 14491 TGCTCCTGGTAT-GCGCGGAATTCTGGAGTCTGGGCCTGCAGCATGCACGTGGCAATACC 14549 Query 127029 TGCAATCGTGTGATTGTGCGGTCCACCTTGCAGGCCAGGAAACACGGC------------ 127076 || || | || |||||||||||||| ||||| || || || ||||| Sbjct 14550 GGCGATGGCATGGTTGTGCGGTCCACCCTGCAGCCCGGGGAAGACGGCCTGATTGACGCG 14609 Query 127077 -------------------------TCG---TTCAATTTCCTGCTCTAGTGAT--TTGCG 127106 ||| ||| |||| ||| | | ||||| Sbjct 14610 CGACTCCAGATCGTACATCACCTTCTCGCCATTCGCTTTCACGCTGCGGACACCCTTGCG 14669 Query 127107 GTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTCACAAT 127166 | | || || || |||||||| || || | ||| || ||||| || || ||| |||||| Sbjct 14670 GAAGAAAATCACACCGGCTCGGGGCCCACGGAGCGTTTTGTGTGTCGTTGTGCTCACAAC 14729 Query 127167 GTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATGTGTGC 127226 || ||||| || || || |||| | |||||| || || | |||||| || Sbjct 14730 ATCGGCGTACTCGAACGGCGACGGGATGATACCGGCCGCAACCAGCCCGGAAATGTGGGC 14789 Query 127227 AATATCGGCCATCAGCAAGGAGCCGG-CTGCATCGGCAATCTCTCGGAATCGTCTATAGT 127285 |||||||| | ||| | | ||| ||| ||| ||||||| ||||| || | |||| Sbjct 14790 CATATCGGCGAACAGGTACGCCCCGTTCTGGTTCG-CAATCTCCCGGAAGCGCTTGTAGT 14848 Query 127286 CCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAGATTGG 127345 ||| || || | ||||| | |||| || ||||| | | | || ||||| || || Sbjct 14849 CCAGGCAGCGCGAGTAGCACGAGATGCCAGCGATGATCACCTTCGGCTTGAACAGGCGGG 14908 Query 127346 CACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTACGGCA 127405 | |||| | | ||| | ||||||| || || ||| || |||||||||||||||| Sbjct 14909 CCGTCTCCTCCATCTTGTCGTAGTCGATCAGCCCCGTCACCGGGTCCACCTTGTACGGCA 14968 Query 127406 TGCTTTCGAAAAAGAGTGATGTAGCGGACA-------CGT-TGCG----GAATCCGTGCG 127453 |||| ||||| |||| || || ||||| | ||| |||| ||| ||||||| Sbjct 14969 TGCTCTCGAAGAAGATGGAGGTGGCGGAGATTTTCTTCGTCTGCGTCATGAACCCGTGCG 15028 Query 127454 TCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAACGATTC 127513 | || ||||| ||||| || || || || |||||||| | |||||||||| | | Sbjct 15029 TAAGATGGCCACCGTCCGGTAGGTCCAGCCCCATGATGCGTCCGTGCGGTTCGATCAGCG 15088 Query 127514 CAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTAC 127559 | || |||||||||||||| ||| || ||||||||||| || || Sbjct 15089 CCGTATACACGGCAAAGTTCGCCGGTGAACCCGAGTACGGCTGCAC 15134 >seq953 Length=6092 Score = 163 bits (180), Expect = 4e-35 Identities = 388/584 (66%), Gaps = 8/584 (1%) Strand=Plus/Minus Query 49794 TTACCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCG 49853 || |||| || || | ||||| || ||||||||||| || ||| ||| ||||| | | Sbjct 3388 TTTCCGTCGAACCGTCAATGTTCCTGTACATGATGGCGTTTATGCTGACGTCGGTCGTGG 3329 Query 49854 AGCAGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGT 49913 |||| ||||| | | | ||| |||||||||| || | || ||||| |||| || || | Sbjct 3328 AGCAAGCGTTCTTCCTCTACAAAGCGTGCACGGTAGATCACGGCTATTCGCACGACGTTT 3269 Query 49914 GCCACAACATTAGCCAGTACGATGACATCAACAACCGAGTCCAGCAGACTGTGTCTACAT 49973 | | ||||| |||||| | || || || || | |||||| ||| ||| || | Sbjct 3268 GTCTAAACATCGAGCAGTACCAGGATATTAAGAAGCAGGTCCAGGTGACGACGTCCACCT 3209 Query 49974 TTCATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTGGCCTTTTTCCTAG 50033 | || ||||||||| | |||| | |||||||| | | ||||| |||| || | Sbjct 3208 TCCACCAGTGGAACAACATCGCCATGTACGTGGTGCCGATCTTTCTGGCCCTTTTTCTCG 3149 Query 50034 GATCCTATAGTGATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGACTCGTAGGTAAAC 50093 | ||| ||| | || || | ||| || ||| | ||||| | || || Sbjct 3148 GCGCCTGGTCCGATCGCCGTGGGCGCAAGCTTCCGCTCATCCTCGGACTGCTCGGGAAGT 3089 Query 50094 TCTTTTTCTCGGCAATGCTAACCGTAAACAGTCTCAAGAGC---TGGCCCGTAGAGTATA 50150 | | | ||||| ||| | || |||| | || | | |||||||| ||||| | Sbjct 3088 TTGTCTACTCGGTGATGATCGTGGTGAACACGCGCATGCCCTCGTGGCCCGTGGAGTACA 3029 Query 50151 TAATCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGCAG 50210 | |||||||| ||| || | || || | || ||||| || ||| | | || ||||| Sbjct 3028 TCATCTACACCGCAACCATACCCAGCGTGCTGACCGGTGCGGATATTGCAATCTTCGCGT 2969 Query 50211 CGTGCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGCA 50270 | ||||| || ||||| |||| | |||| || ||| | || ||||| || | | Sbjct 2968 CCTGCTTCGCGTACATCTCCGACATCACGACGGTCGAGGAGCGTACGCTGCGCATCACGA 2909 Query 50271 TCTTGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTAGTGTGCTGT 50330 | |||| || ||||||||||||||||| | ||| || ||| |||||| |||| | | Sbjct 2908 TTCTGGACGCGACGTACCTGAGCACGATGCCGATCGGGGTCGCGCTCGGTAATGTGATCT 2849 Query 50331 GGAAGCGATTCCG----ATCCTACCCCATCATGTTTGCAATCAA 50370 || | || | | ||| ||| | |||||||| | ||||| Sbjct 2848 TCAATC-ATACGGGCAAATCGTACACGATCATGTTCACCATCAA 2806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740866765452240