Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq9632 138 1e-27 >seq9632 Length=10527 Score = 138 bits (152), Expect = 1e-27 Identities = 234/339 (69%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 ||| || || || ||||| || || || | ||||| ||| ||| ||| | |||||| Sbjct 9141 GCCAGTCGATCCAAATCCTCCAGCCCCACGATCCGTGTCGGTCAGCGACGGTAGCTCTTC 9200 Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 || || || | || |||||||| | ||||| || || || ||| |||| || Sbjct 9201 CAAGTCCGGATAGGCTATCTTTTCGCAGATGAATTGCGCAATACGATCACCCTTCTTCAC 9260 Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682 | ||||||| | | | | |||||||||||| || || ||||| || |||||||| | Sbjct 9261 CACGAAATCCATCTCGGAGTGGTTGAACAGCACAACACCAACGTTTCCCCGGTAGTCCTC 9320 Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 ||| | || || || ||||| |||||||||| || ||||| || ||||| || || || Sbjct 9321 GTCAACGACACCTGCCCCCACATCGATGAAGTTTTTCACCGCTAGCCCGGACCGTGGCGC 9380 Query 5743 CACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCG 5802 ||| || ||||| || || || || | ||| | ||| | ||| || | || | || Sbjct 9381 CACACGCCCGTAACAGCCTTCCGGTACCTGCACCTGGATGTCGGTCATTACGAGCTGCTT 9440 Query 5803 ACCGCCCGCAGGGACGATGCAGTCGCAAGCGCTGCAGAG 5841 || | || || || || ||||| | |||||| |||| Sbjct 9441 GCCTCGGGCGGGTACCGTGTAGTCGTAGGCGCTGGAGAG 9479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429945517483088