Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq17768 105 8e-18 >seq17768 Length=40426 Score = 105 bits (116), Expect = 8e-18 Identities = 216/315 (69%), Gaps = 12/315 (4%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||||| | |||||| | ||||| || ||||| |||||| |||||| Sbjct 3650 ATTGGGATTTTGGAAGAATGGGCATTGGTGGTCTGGATCGTGAATTTAACGCAATTTTCC 3591 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 ||||||| ||||| || ||| | |||| || | | | | | || || |||| Sbjct 3590 GACGAGCTTTTGCATCAAGAGTATTTCCCCCGGAGGTGGTCGAGCAGCTTGGATGCAAAC 3531 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 || | || || || || | |||| || |||||| ||| ||||| || ||||| || Sbjct 3530 ATGTGAAGGGTATACTACTGTATGGTCCACCTGGTACCGGCAAAACTTTGATGGC--GAG 3473 Query 164573 GCA--TTGCT-CAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAAT 164626 ||| ||| | ||| | |||| |||||| || |||||||||||||| ||| || Sbjct 3472 GCAGATTGGTACAA--TGCTAAACGCTCGCGAACCC--AAAATTGTTAATGGACCTCAAA 3417 Query 164627 TATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTG 164686 | ||| |||| ||||| || || || ||||| || ||| | ||||| || || | Sbjct 3416 TTTTGGACAAGTATGTTGGCGAATCTGAAGCGAACGTTCGGCGACTGTTTGCTGATGCGG 3357 Query 164687 AAGAAGAACAAAAGA 164701 | |||||| |||||| Sbjct 3356 AGGAAGAAGAAAAGA 3342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595717266938400