Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq17868 89.7 3e-13 seq19312 87.8 9e-13 seq18107 87.8 9e-13 seq3614 82.4 4e-11 >seq17868 Length=2450 Score = 89.7 bits (98), Expect = 3e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||| | || |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 223 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 164 Query 11515 CTGAGCTAATGGGCCG 11530 |||||||| | |||| Sbjct 163 CTGAGCTATGGAGCCG 148 >seq19312 Length=2543 Score = 87.8 bits (96), Expect = 9e-13 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 ||||||| | || |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1333 AATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACC 1274 Query 11513 AACTGAGCTA 11522 | |||||||| Sbjct 1273 AGCTGAGCTA 1264 Score = 87.8 bits (96), Expect = 9e-13 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| | || |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1832 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1773 Query 11516 TGAGCTA 11522 ||||||| Sbjct 1772 TGAGCTA 1766 Score = 84.2 bits (92), Expect = 1e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||| | || |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 2242 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 2183 Query 11515 CTGAGCTA 11522 |||||||| Sbjct 2182 CTGAGCTA 2175 Score = 82.4 bits (90), Expect = 4e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| | || |||||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 377 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 318 Query 11516 TGAGCTA 11522 ||||||| Sbjct 317 TGAGCTA 311 >seq18107 Length=1714 Score = 87.8 bits (96), Expect = 9e-13 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||| | || |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 507 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 448 Query 11516 TGAGCTA 11522 ||||||| Sbjct 447 TGAGCTA 441 >seq3614 Length=15562 Score = 82.4 bits (90), Expect = 4e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 11464 GAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAA 11523 || |||||||||| ||||||||||||||||||||||||||||| |||| |||||||| Sbjct 15554 GAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAT 15495 Query 11524 TGGGCCG 11530 | |||| Sbjct 15494 GGAGCCG 15488 Lambda K H 0.640 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261424994840824