Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5118 168 1e-37 >seq5118 Length=16762 Score = 168 bits (186), Expect = 1e-37 Identities = 200/271 (74%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | || || ||||||||||| || ||||| ||||| || ||| Sbjct 8040 GCCAAGCGTCACCGGAAGGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCCATC 8099 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||| || ||||| || || |||||| |||| || || |||| || || | Sbjct 8100 CGTCGTCTGGCGCGCCGTGGCGGTGTGAAGCGTATCTCCGGCCTGATCTACGAGGAAACG 8159 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| ||||| ||||||| | | ||| || | ||| || | ||| |||||| Sbjct 8160 CGTGGTGTGCTGAAGGTCTTCCTGGAAAACGTAATTCGTGACGCCGTAACCTACACCGAG 8219 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || ||||||||||| || | |||||| | || || || |||| || || ||| Sbjct 8220 CACGCCAAGCGTAAGACTGTAACGGCGATGGATGTGGTATACGCTCTGAAGCGCCAGGGC 8279 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 |||| | | || || ||||| ||||| ||| Sbjct 8280 CGTACGCTGTACGGCTTTGGTGGTTAAGCTT 8310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79056206186382