Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3577 396 3e-105 seq17361 149 8e-31 >seq3577 Length=7701 Score = 396 bits (438), Expect = 3e-105 Identities = 1202/1850 (65%), Gaps = 24/1850 (1%) Strand=Plus/Plus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || || ||||| || | ||||||||| || || || | ||| | |||| ||| ||| Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 5791 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 || || || ||||| || | || || || | || || || | ||||| Sbjct 5792 TGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 5851 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195 || |||||||| ||||| | || || ||||||| ||| ||| || | ||| ||| Sbjct 5852 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTGACCGAAATCTCC 5911 Query 62196 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATGGA 62251 |||| ||||| || | |||| | ||| ||| | || | ||||| || || Sbjct 5912 CAAACCGTTTTGTACAGATCGCGCACGTCCTT-TGGTATTTTCTCAATCTTCTGGATCGA 5970 Query 62252 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62311 ||| | |||| || | ||||| || ||||| | ||| | | |||| | Sbjct 5971 TCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTCAG 6030 Query 62312 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62371 | | | ||||| | || || || ||||| || || || | |||| || |||| Sbjct 6031 GTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTA 6090 Query 62372 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62431 | || || ||||| || | ||||| || || ||||| ||||||||||| || || Sbjct 6091 GACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGC 6150 Query 62432 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62491 || ||||| ||||| | || | || | || || | | || ||| || || || Sbjct 6151 TGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTT 6210 Query 62492 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62551 | | |||||||||| || |||| |||| | || ||||| Sbjct 6211 CAATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAAT 6270 Query 62552 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62610 || || || | | || | ||| | || || ||||| || || ||||| | || | || Sbjct 6271 GCCCTTGCTTACCGGACAA-CCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATT 6329 Query 62611 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62670 | || || || || || || || || || |||||||| || || | || ||| || | || Sbjct 6330 CGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTT 6389 Query 62671 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAA 62730 | |||| | || || | ||| | | | ||| ||||| || || | || || | Sbjct 6390 GCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGA 6449 Query 62731 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62790 |||| || ||||| || | || | | | || ||| || ||||| || | || || | Sbjct 6450 CACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGT 6509 Query 62791 AATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCA 62847 | || | || || || || || ||||| | | || || ||| | || ||||||| Sbjct 6510 AGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATC---TTGGCGACCTCCTTCA 6566 Query 62848 GTTTGAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAAGGCAACAGATGCCA 62904 | || ||||| | | ||| |||||||||||||| |||| || |||| Sbjct 6567 GCTTCTTGAAATCGTACGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCA 6626 Query 62905 GATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATT 62962 ||| || ||||| || || | | || || || | | ||||||||||||||| || Sbjct 6627 AATTGCACACGGCCACTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTT 6684 Query 62963 ACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 63022 ||||||||| || || | ||||| || || || || || ||||||||||| || Sbjct 6685 CGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTA 6744 Query 63023 AAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCG 63082 || ||| | || || ||||| | ||| || || || ||||| ||| | || | Sbjct 6745 CAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTG 6804 Query 63083 AGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAA 63142 ||||| | | | | | | | | ||| ||||| || |||| ||||| Sbjct 6805 CGCCTTCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAA 6864 Query 63143 CTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTC 63202 ||| || ||||| || | ||||||| ||||| || | ||| |||||||| |||| Sbjct 6865 CTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACAT 6924 Query 63203 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 63262 | | | ||| ||| || ||||| || ||||| || ||||| ||||| || | || Sbjct 6925 TTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTC 6984 Query 63263 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 63322 | | | | ||||| || || || || || || ||||| || ||| | | | ||| Sbjct 6985 GCGAGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATC 7044 Query 63323 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 63382 | ||||||||||| | ||| || || | | || ||||| || || || |||||||| Sbjct 7045 ACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATC 7104 Query 63383 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACC 63442 | ||| | || ||||| || || || | | ||| || | | ||||| || ||||| Sbjct 7105 AACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACC 7164 Query 63443 ATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATT 63500 || ||||||||||| || |||| | ||||| || | | | ||| | | || || Sbjct 7165 GTTCGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GCCCGATA 7222 Query 63501 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATG 63560 || || ||| ||| ||||| |||||||| | || || || || |||||||| || ||| Sbjct 7223 CCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATG 7282 Query 63561 CTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 63620 ||||| || ||| | || ||||| || || | || |||| || |||| Sbjct 7283 CTATCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCC 7342 Query 63621 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCA 63680 ||| | ||| ||||| ||||| ||||| | || ||||| |||||||||||||| Sbjct 7343 GCAAACATGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCG 7402 Query 63681 ATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63740 || |||| || || ||| || || || | ||||||||||| ||||| ||||| Sbjct 7403 ATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGC 7462 Query 63741 GGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63800 || || || || ||||| ||||| |||||||| || ||| |||| ||||||||| Sbjct 7463 GGCCTCTCCACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAA 7522 Query 63801 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 || |||||||| || |||||| || |||||||| || |||| || || Sbjct 7523 CCGAAATAGTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 >seq17361 Length=8649 Score = 149 bits (164), Expect = 8e-31 Identities = 362/546 (66%), Gaps = 7/546 (1%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 ||||||| || || || || |||||||| |||||||| | || || |||||||| Sbjct 694 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTGGAG 753 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 ||||| || || ||||||||||| ||||| || ||||| || || | || || ||| Sbjct 754 AACGTCAGCCCCGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCA 813 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 33474 ||||| || || || || ||||| ||||||| | | ||| || | ||| || Sbjct 814 CTGAAGAAAATGCCCTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAAGTTGGC-CT- 871 Query 33475 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33529 || || ||||| || | ||||| ||||||||||| || || || || | ||||| Sbjct 872 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTT 931 Query 33530 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33589 | || || || || ||||| | || || || | || || ||||||| | Sbjct 932 CGATCGCGTTGAACAGATACTCCCGCTCGTTCGGGTCGCGTATGTACGTGTCGATCAGCA 991 Query 33590 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33649 | |||||||| || | ||| || || || |||||||| |||||||| || | | Sbjct 992 GCGAGTACATTTCACTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 1051 Query 33650 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGT 33709 |||| || | ||| || || | || || ||| ||| ||| || || || || |||| Sbjct 1052 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 1111 Query 33710 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 33769 | ||| || || || || | ||| || || || | ||| ||| | || Sbjct 1112 CCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGTTTGAGCG 1171 Query 33770 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 33829 | ||| || || || || || || | || || |||||||||||||| || || || | Sbjct 1172 ATTCCCAGTCTTTCATGTCCTTCGACAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTT 1231 Query 33830 CTGCCT 33835 | |||| Sbjct 1232 CCGCCT 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622785436185840