Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3577 214 5e-50 seq4838 109 1e-18 >seq3577 Length=7701 Score = 214 bits (236), Expect = 5e-50 Identities = 711/1094 (65%), Gaps = 19/1094 (2%) Strand=Plus/Minus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 |||||| | ||| ||| ||||| ||| || | | || || || | ||||| || Sbjct 7528 TTTCGGTTTTAAAACGCTGGAGCGATCGTATTTGTTGAAGATAAAGGGAAAGATTGTGGA 7469 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | |||||||||||||| |||||||| || || || ||||| || ||| |||| || Sbjct 7468 GAGGCCGCAGCATATGTTGATGCGTGTCGCCATCGGCATCCACGGCGAGGACATTGAGGC 7409 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAAT 363569 ||||| || || || || || || | ||| || || |||||| | || || || Sbjct 7408 AGCGATCGAGACGTACAATCTGCTTTCGGAGCGTTACTTTACCCACGCCTCTCCGACCAT 7349 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 || || | || | ||| ||| | || ||||||||||| || | ||| ||| Sbjct 7348 GTTTGCGGCGGCCACCCAGCGTCCTCAGCTTTCGTCTTGCTTTCTGCTGACGATGTCGGA 7289 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 |||| |||||| ||||||| || ||| | ||| | || || | || ||||| || Sbjct 7288 CGATAGCATCGACGGTATCTACGATACATTGAAGCAGTGCGCATTGATCTCCAAATCGGC 7229 Query 363690 AGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGC 363747 || || || || || || | ||| | ||||| || | ||||| ||| Sbjct 7228 CGGTGGTATCGGGCTGAATG--TGCACTGCATCCGTGCGAAGGGAACGTACATCTCCGGT 7171 Query 363748 AC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || | || || ||||| ||| |||| || ||||| ||||||| |||| || || | Sbjct 7170 ACGAACGGTATT-TCGAACGGGTTGGTACCGATGCTACGTGTGTACAACAACACGGCACG 7112 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 |||||| || ||||| || ||||| ||| ||||||||||| || ||||| || Sbjct 7111 GTACGTTGATCAGGGCGGTAATAAGCGGCCAGGCGCGTTTGCTATCTACCTCGAACCGTG 7052 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | ||||||||||| || || ||||||||| || || ||||| | || Sbjct 7051 GCACGGTGATGTGTTTGAGTTTCTGGATCTGAAGAAAAACACCGGCAAGGAGGAGGTTCG 6992 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || || || ||||||| || || ||| | | || | || |||||||| |||||||| Sbjct 6991 CGCTCGCGACATGTTCTACGCTCTCTGGATACCGGATCTGTTCATGAAGCGTGTGGAGGC 6932 Query 363987 AGGTAAGAATTGGTCACTCT--TTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | ||| || | | | | ||||| ||||| ||||| || | ||||| ||| Sbjct 6931 --GAATGAAATGTGGAGTTTGATGTGCCCGCACGACTGTCCCGGATTGGCCGATTCGTGG 6874 Query 364045 GGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 || || || | | ||| || ||| || || | ||| | || | || | Sbjct 6873 GGCGAAGAGTTCGAGAAGCTGTACACG--GGTTACGAGGCAGAGTG-TCGGTTTATACGT 6817 Query 364103 CAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 ||| | || || | || |||||||| ||||| || || ||| | || || || | Sbjct 6816 CAAGTGAAGGCGCAAGATCTGTGGTTTGCGATCATCGAGTCACAGGTGGAAACGGGCGTA 6757 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 || || ||| ||||||| ||| ||||||| ||||| ||||||||| || | || || Sbjct 6756 CCGTACATGCTGTACAAGGATGCGTGCAATCGCAAAAGCAACCAGCAAAACATCGGCACC 6697 Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || || ||||| || || ||||| | || ||| | | ||||| ||| Sbjct 6696 ATCAAGTGTTCGAACCTTTGCACTGAGATAGTGGAGTACTCGTCGAAGGACGAAGTGGCC 6637 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA---AGATGGTACTTTTGAC 364338 || || || | || ||||| ||| | |||||| | ||| |||| | || Sbjct 6636 GTGTGCAATTTGGCCTCGATTGCGTTGAACATGTTTGTCCAGCCCGATCGTACGTACGAT 6577 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398 | || | || | || || || | | || ||||||| ||||| | || ||| Sbjct 6576 TTCAAGAAGCTGAAGGAGGTCGCCAAGATCGTAACGCGCAATCTTAACAAGATCATTGAC 6517 Query 364399 AAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGT 364458 ||| || || || | || ||||| | || || || ||||| || || ||||| || Sbjct 6516 GTGAACTACTACCCGGTGCCGGAAGCGAAACGCTCGAACATGCGCCACCGTCCGATCGGC 6457 Query 364459 CTTGGTGTACAGGG 364472 | ||||| ||||| Sbjct 6456 ATCGGTGTCCAGGG 6443 Score = 107 bits (118), Expect = 5e-18 Identities = 286/437 (65%), Gaps = 0/437 (0%) Strand=Plus/Minus Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 || ||||| | ||| ||||| || | ||| || ||||| || ||||| ||||| || Sbjct 6195 AAACATGGGATTCGTAACTCACTGCTGCTAGCACCGATGCCAACAGCTTCGACTGCTCAA 6136 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 || | || |||||||||| ||||| |||| || || | || || || || Sbjct 6135 ATATTGGGCAACAACGAGTCTTTCGAGCCGTACACGTCGAACGTCTACAACCGACGAGTG 6076 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 ||||| || || |||| ||| || || | | || ||||||| || ||| | |||| Sbjct 6075 CTTTCGGGCGAGTTTCAGGTTGTGAACCATCATCTGATCAAGGACCTGACCGCGCACGGG 6016 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 ||||||| || ||||||||| ||| | || || || || | ||||| ||| Sbjct 6015 CTGTGGGACGATGAAATGAAGAACACAATCCTGGCGCACAACGGATCGATCCAGAAGATT 5956 Query 364960 CCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGA 365019 | | ||| | || || | | |||||||| || ||||| ||||| | | Sbjct 5955 GAGAAAATACCAAAGGACGTGCGCGATCTGTACAAAACGGTTTGGGAGATTTCGGTCAAA 5896 Query 365020 ACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079 || ||| | |||||||||||||| || || || ||| ||| ||| ||||| ||| Sbjct 5895 ACGTGCATCCAAATGGCGGCCGATCGTGGAGCGTTCATCGACCAGTCCCAATCGTTCAAC 5836 Query 365080 GTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 || | || | | || | || || || ||||| || || || || ||| |||||| Sbjct 5835 ATACACGTGGCCGAACCCAACTACGGTAAACTTACCTCGATCCACTTTCACGCGTGGAAG 5776 Query 365140 TCCGGTCTTAAGACAgg 365156 ||| | ||||| || Sbjct 5775 ATGGGTTTGAAGACTGG 5759 >seq4838 Length=6282 Score = 109 bits (120), Expect = 1e-18 Identities = 217/319 (68%), Gaps = 2/319 (1%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||||||| | || || || ||||| ||||||||||| |||||||| ||| | |||||||| Sbjct 812 AGGTGATTTGGGGCCTGTGTACGGTTTTCAATGGCGACACTTTGGGGCAAAATACAAAAC 753 Query 111548 CATGCACGACTCATATGATTCACAGGGAACTGATCAA-TTACAGAATGTCATTGATCAAA 111606 || ||| || | || || | || ||| || ||| | || || || | | Sbjct 752 GTGCCATGACGATTACACTGGGCAAGGCATAGACCAACTTGCAG-AGGTAATCGACAAGA 694 Query 111607 TTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGG 111666 |||| |||||||| |||||| || || ||||| || ||||| || | | | Sbjct 693 TTAAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGACCGATATCC 634 Query 111667 AAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGC 111726 || ||||| |||||||| |||||| || || |||| ||| | |||| Sbjct 633 CCAATATGGCTCTTCCACCTTGTCATTGCTTGGCTCAATTTTTTGTTGATAACGGAGAAT 574 Query 111727 TTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTG 111786 | |||||||| |||||||| ||||| || || | || | ||||| || || || || | Sbjct 573 TATCATGCCAGATGTATCAACGATCGGCCGACGTGGGCTTGGGTGTACCATTCAACATCG 514 Query 111787 CAAGTTACGCACTACTTAC 111805 |||| ||| | || ||||| Sbjct 513 CAAGCTACTCGCTGCTTAC 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303006690445268