Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3577 266 3e-66 seq5408 161 9e-35 seq3192 141 9e-29 seq17361 125 7e-24 seq5576 104 2e-17 >seq3577 Length=7701 Score = 266 bits (294), Expect = 3e-66 Identities = 1180/1837 (64%), Gaps = 46/1837 (3%) Strand=Plus/Plus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || ||||| |||||||||||||||||||| || || | ||| ||| | || | Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 5791 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || ||||| || | | |||| |||| || ||||| | || | ||||||| Sbjct 5792 TGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 5851 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCATT-TC 144918 || || ||||| || || ||||| ||||| | || |||||| | | | || Sbjct 5852 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGC-ACGTTTTGACCGAAATCTC 5910 Query 144919 CCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGA 144978 |||| | || ||||||| | | || | || || |||||| ||| ||||| Sbjct 5911 CCAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCAATCTTCTGGATCGA 5970 Query 144979 CCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGT-ACAGTTTTAACTTGATCA 145037 || |||||||| | || | |||| |||||| ||| |||| | | ||| Sbjct 5971 TCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCAT-CGTCCCACAGCCCGTGCGCGGTCA 6029 Query 145038 AGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAAT 145097 ||| | || | | || || || |||||||||||||| | | ||| || || | Sbjct 6030 GGTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGT 6089 Query 145098 ACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTG 145157 | ||||| |||||| | || || ||||||||||| ||||||| |||||||| |||| | Sbjct 6090 AGACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAG 6149 Query 145158 CGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCT 145217 | || ||||| || | || | ||| || || | || || || ||| | ||||| Sbjct 6150 CTGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCT 6209 Query 145218 TTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAA 145277 | | | |||||| ||| || ||||| | || ||||||||||||||||| || Sbjct 6210 TCAATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAA 6269 Query 145278 TGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGC- 145336 |||||| ||| | || | |||| | | ||| | |||| | |||||| | Sbjct 6270 TGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTA-CGGCCC--ATCCTTGGCGGCCA 6326 Query 145337 --TCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCA 145394 ||||| || || |||| || || | || || || || |||||| |||||| Sbjct 6327 ATTCGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCT 6386 Query 145395 GCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCT 145454 ||||| || ||||||||||| | || || || | || |||||||| | |||| Sbjct 6387 TTTGCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCT 6446 Query 145455 GTATTCCCACGCCGATGGGCCGATGTTTCATGTT-GCTCATCCTCGCCGACTCGATAGGA 145513 | | || | |||||| || || || |||||| | | | |||| | | || Sbjct 6447 GGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTT-TCGCTTCCGGCACCGGG 6505 Query 145514 TA-TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCG 145572 || | | | ||| || || || || || | || ||| ||| | ||| | | | | Sbjct 6506 TAGTAGTTCACG-TCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTT 6564 Query 145573 CAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGA 145632 || ||| | || || || | ||| ||| | ||| | || | || ||||| Sbjct 6565 CAGCTTCTTGAAATCGTACGTACGATCGGGCTGGACAA-ACA--TGTTCAACGCAATCGA 6621 Query 145633 CGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTCGGCGCACA 145691 |||||||| || || ||| || || || || ||| | || ||||| | ||| | Sbjct 6622 GGCCAAATTGCACACGGCCACTTCGTCCTTCGACGA-GTACTCCACTATCTCAGTGCAAA 6680 Query 145692 AATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCT 145751 || ||| |||||||| || | |||||||| || ||||| | |||||||| |||| Sbjct 6681 GGTTCGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCT 6740 Query 145752 TGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAA 145809 |||| |||||||||||| |||| || |||||||| | ||| | ||| |||| || Sbjct 6741 TGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAAC--CACAG 6798 Query 145810 GTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTC 145869 || ||||| ||| || | | || | |||| | ||||| | |||| |||| Sbjct 6799 ATCTTGCGCCTTCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTT 6858 Query 145870 CTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGA 145929 ||| ||| | || | |||||| || |||||||| | || || ||||||| Sbjct 6859 CTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACT 6918 Query 145930 CCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACAT 145989 ||| | | || || | || |||| ||| |||| ||| || | ||| || ||||| | Sbjct 6919 CCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAA 6978 Query 145990 CAAGTCGCGCGCTTTGCAA---TCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT 146046 || |||||| || || | ||||| || ||||| ||||| || || | ||| Sbjct 6979 CATGTCGCGAGC---GCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAG-AAACT 7034 Query 146047 -ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGC 146102 | | | || ||||||||||||| | |||| || | || ||| || || | Sbjct 7035 CAAACACATCACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTAC 7094 Query 146103 CACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGC 146162 | ||||| || |||| ||| || ||||||| | || || | ||| || | | ||| Sbjct 7095 CGCCCTGATCAACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGT 7154 Query 146163 TGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCA 146222 | | | ||||||||| | || || || | || | ||| || ||||||| Sbjct 7155 TCGAAATACCGTTCGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA 7214 Query 146223 CGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGC 146282 |||| ||| ||| | | ||||| || ||||| | | || |||||||| | Sbjct 7215 GCCCGATACCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATAC 7274 Query 146283 CGTCAATGCTATCGCTTCGA-ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGC 146341 |||| ||||||||| | ||| || ||||||||||| || | | ||| | | | Sbjct 7275 CGTCGATGCTATCG-TCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGG 7333 Query 146342 GTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGA 146401 || |||||| |||| ||||| ||||| ||||| | || | | | || Sbjct 7334 GTGGCCGCCGCAAACATGGTCGGAGAGGCGTGGGTAAA---GTAACGCTCCGAAAGCAGA 7390 Query 146402 ---TACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATG 146458 ||||| ||||| || | | |||||| ||||| || ||||| | ||||| ||||| Sbjct 7391 TTGTACGTCTCGATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATC 7450 Query 146459 AGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTT--CT 146516 | ||| || || |||| |||| | | | | ||||| |||||||| || | || Sbjct 7451 AACATATGCTGCGGCCTCTCCACAATCTTTCCCTTTATCTTCAACAAATA--CGATCGCT 7508 Query 146517 CCAGGGTTTTGTATCCGAAAAATTTGTACGTATAGTC 146553 |||| ||||| | |||||| | || ||| | |||| Sbjct 7509 CCAGCGTTTTAAAACCGAAATAGTTATACCCAAAGTC 7545 >seq5408 Length=43822 Score = 161 bits (178), Expect = 9e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || ||||| | ||| | |||||||||||| || || ||||||||| | Sbjct 36917 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGAC 36976 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| ||||| ||| Sbjct 36977 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 37036 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | ||| | ||||| | || ||||| Sbjct 37037 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 37096 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| ||||| |||||||| Sbjct 37097 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37143 >seq3192 Length=14073 Score = 141 bits (156), Expect = 9e-29 Identities = 167/226 (74%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || || || | |||||||||||| || |||||||| ||| | Sbjct 227 CCACCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 168 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||| || |||||| Sbjct 167 AGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 108 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | ||| | ||||| | | ||||| Sbjct 107 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTATCCGATGGCTCGACC 48 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233 || | || | ||| || || || || || || ||||| |||| || Sbjct 47 TCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTCCA 2 >seq17361 Length=8649 Score = 125 bits (138), Expect = 7e-24 Identities = 185/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 46049 ACGAGCGCGACACGCTGCTTAATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCG 46108 ||||||| || ||| | || ||| | ||| | |||||||| ||||| ||| Sbjct 961 ACGAGCGGGAGTATCTGTTCAACGCGATCGAAACGCTACCGTGCGTCAAGAAGAAGGCCG 902 Query 46109 ACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCT 46168 |||||||| |||| |||||| ||||| | || | |||| |||||| |||| |||| Sbjct 901 ACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGCCAACTTCGGGGAGCGTGTGGTTGCCT 842 Query 46169 TTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAAA 46228 | || || |||||| | || || |||||| ||||| || ||||| | | || | Sbjct 841 TCGCTGCCGTTGAGGGCATTTTCTTCAGTGGCAGCTTTGCGGCTATCTTCTGGCTGAAGA 782 Query 46229 CCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCC 46288 ||| | ||||| || |||||||| |||||||||||| |||||||||||||| | Sbjct 781 AGCGCGGCCTAATGCCGGGGCTGACGTTCTCCAACGAGCTGATCTCGCGCGACGAGGGAC 722 Query 46289 TGCATACGGACTTTGCGTGTCT 46310 |||| |||||||| || || Sbjct 721 TGCACTGTGACTTTGCCTGCCT 700 >seq5576 Length=36905 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | || | || |||||||| || || ||||| || | Sbjct 18786 CCACCACGGAGTCGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGAC 18727 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || |||||||| || ||| |||| | ||||||||| ||||||||| Sbjct 18726 AGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 18667 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || || || ||| | | || | || || | || ||||| Sbjct 18666 ATGCCTTCCTTATCCTGAATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACC 18607 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || ||||| |||||||||||||| Sbjct 18606 TCAAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 18560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471890230076160