Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq15712 84.2 3e-11 >seq15712 Length=12775 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126181 GTGTAAATGTAGCGGGGAGCTGCCGA-ATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 ||| | ||||| | || |||| || ||||||||| ||| ||||||||| |||||||| Sbjct 3388 GTGAAGATGTACCTAGG-GCTGGCGCTATCCTTGCCACCCGTCAACCGCGTACCAAACTG 3446 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299 |||| |||| | || || | | |||||| || || ||| |||||| | |||| Sbjct 3447 ACCGCCCGGATACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 3506 Query 126300 AATGGTCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCA-CGTAGC 126358 || ||| ||| || |||||||||||| | ||| ||| | || |||| || | | Sbjct 3507 GATCGTCGAGCAGAGCGACTGCTCGCCGTGATGGTAAGCGGACATTTCCGCCACCGAACC 3566 Query 126359 CGCTCAGCTGCGCAACCTT 126377 ||| || ||| || ||||| Sbjct 3567 CGC-CAACTGGGCCACCTT 3584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611233236782400