Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3577 378 9e-100 seq17361 131 2e-25 >seq3577 Length=7701 Score = 378 bits (418), Expect = 9e-100 Identities = 1198/1850 (65%), Gaps = 24/1850 (1%) Strand=Plus/Plus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || || ||||| || | ||||||||| || || || | ||| | |||| ||| ||| Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 5791 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || || || ||||| || | || || || | || || || | ||||| Sbjct 5792 TGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 5851 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 || |||||||| ||||| | || || ||||||| || ||| || | ||| ||| Sbjct 5852 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTGACCGAAATCTCC 5911 Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATGGA 62106 |||| ||||| || | |||| | ||| ||| | || | ||||| || || Sbjct 5912 CAAACCGTTTTGTACAGATCGCGCACGTCCTT-TGGTATTTTCTCAATCTTCTGGATCGA 5970 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62166 ||| | |||| || | ||||| || ||||| | ||| | | |||| | Sbjct 5971 TCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCATCGTCCCACAGCCCGTGCGCGGTCAG 6030 Query 62167 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62226 | | | ||||| | || || || ||||| || || || | |||| || |||| Sbjct 6031 GTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTA 6090 Query 62227 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62286 | || || ||||| || | |||||| || || ||||| ||||||||||| || || Sbjct 6091 GACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGC 6150 Query 62287 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62346 || ||||| ||||| | || | || | || || | | || ||| || || || Sbjct 6151 TGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCCTT 6210 Query 62347 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62406 | | |||||||||| || |||| |||| | || ||||| Sbjct 6211 CAATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAAT 6270 Query 62407 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62465 || || || | | || | ||| | || || ||||| || || ||||| | || | || Sbjct 6271 GCCCTTGCTTACCGGACAA-CCTTCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATT 6329 Query 62466 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62525 | || || || || || || || || || |||||||| || || | || ||| || | || Sbjct 6330 CGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTT 6389 Query 62526 GCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 62585 |||||| | || || | ||| | | | ||| ||||| || || | || || | Sbjct 6390 GCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGA 6449 Query 62586 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62645 |||| || ||||| || | || | | | || ||| || ||||| || | || || | Sbjct 6450 CACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGGTAGT 6509 Query 62646 AATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCA 62702 | || | || || || || || ||||| | | || || ||| | || ||||||| Sbjct 6510 AGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATC---TTGGCGACCTCCTTCA 6566 Query 62703 GTTTGAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAATGCAACAGATGCCA 62759 | || ||||| | | ||| |||||||||||||| |||| || |||| Sbjct 6567 GCTTCTTGAAATCGTACGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCA 6626 Query 62760 GATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGATT 62817 ||| || ||||| || || | | || || || | | ||||||||||||||| || Sbjct 6627 AATTGCACACGGCCACTTCGTC--CTTCGACGAGTACTCCACTATCTCAGTGCAAAGGTT 6684 Query 62818 ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 62877 |||||||||||| || | ||||| || || || || || ||||||||||| || Sbjct 6685 CGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTA 6744 Query 62878 AAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCG 62937 || ||| | || || ||||| | ||| || || || ||||| ||| | || | Sbjct 6745 CAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATCTTG 6804 Query 62938 AGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAA 62997 ||||| | | | | | | | ||| ||||| || |||| ||||| Sbjct 6805 CGCCTTCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAA 6864 Query 62998 CTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTC 63057 ||| || ||||| || | ||| ||| ||||| || | ||| |||||||| |||| Sbjct 6865 CTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACAT 6924 Query 63058 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 63117 | | | ||| ||| || ||||| || ||||| || ||||| ||||| || | || Sbjct 6925 TTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTC 6984 Query 63118 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 63177 | | | | ||||| || || || || || || ||||| || ||| | | | ||| Sbjct 6985 GCGAGCGCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATC 7044 Query 63178 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 63237 | ||||||||||| | ||| || || | | || ||||| || || || |||||||| Sbjct 7045 ACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATC 7104 Query 63238 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACC 63297 | ||| | || ||||| || || || | | ||| || | | || || || |||| Sbjct 7105 AACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACC 7164 Query 63298 ATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATT 63355 || || || ||||| || |||| | ||||| || | | | ||| | | || || Sbjct 7165 GTTCGTACCGGAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCA--GCCCGATA 7222 Query 63356 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 63415 || || ||| ||| ||||| |||||||| | || || ||||| ||||| || || || Sbjct 7223 CCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATG 7282 Query 63416 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 63475 ||||| ||| ||| | || ||||| || || | || |||| || |||| Sbjct 7283 CTATCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCC 7342 Query 63476 TTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCA 63535 ||| | ||| ||||| ||||| ||||| | || ||||| |||||||||||||| Sbjct 7343 GCAAACATGGTCGGAGAGGCGTGGGTAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCG 7402 Query 63536 ATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63595 || |||| || || ||| || || || | ||||||||||| ||||| ||||| Sbjct 7403 ATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGC 7462 Query 63596 GGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63655 || || || || ||||| ||||| |||||||| || ||| |||| ||||||||| Sbjct 7463 GGCCTCTCCACAATCTTTCCCTTTATCTTCAACAAATACGATCGCTCCAGCGTTTTAAAA 7522 Query 63656 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 || |||||||| || |||||| || |||||||| || |||| || || Sbjct 7523 CCGAAATAGTTATACCCAAAGTCACGATCGTAAATGATGGCCGAATTTAG 7572 >seq17361 Length=8649 Score = 131 bits (144), Expect = 2e-25 Identities = 358/546 (66%), Gaps = 7/546 (1%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 ||||||| || || || || ||||| || |||||||| | || | |||||||| Sbjct 694 AACATCAGGCAGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTGGAG 753 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 ||||| || || ||||||||||| ||||| || ||||| || || | |||||| ||| Sbjct 754 AACGTCAGCCCCGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCA 813 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 |||||||| || || || || || ||||||| | | ||| || | ||| || Sbjct 814 CTGAAGAAAATGCCCTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAAGTTGGC-CT- 871 Query 32832 TCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 32886 || || ||||| || | ||||| ||||||||||| || || || || | || | Sbjct 872 TCTTGCTGGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTT 931 Query 32887 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 32946 | || || || || ||||| | || || || | || || || |||| | Sbjct 932 CGATCGCGTTGAACAGATACTCCCGCTCGTTCGGGTCGCGTATGTACGTGTCGATCAGCA 991 Query 32947 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAG 33006 | |||||||| || | ||| || || || || ||||| ||||||||||| | | Sbjct 992 GCGAGTACATTTCACTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGG 1051 Query 33007 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 33066 |||| || | ||| || || | || || || | | ||| || || || || |||| Sbjct 1052 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGT 1111 Query 33067 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 33126 | ||| || || || || | ||| || || || | ||| ||| | || Sbjct 1112 CCGAGGCGGCGAAGAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGTTTGAGCG 1171 Query 33127 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 | ||| || || || || || || | ||||| |||||||||||||| || || || | Sbjct 1172 ATTCCCAGTCTTTCATGTCCTTCGACAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTT 1231 Query 33187 CTGCCT 33192 | |||| Sbjct 1232 CCGCCT 1237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633467461610400