Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq8981 113 4e-20 seq5408 87.8 1e-12 >seq8981 Length=25070 Score = 113 bits (124), Expect = 4e-20 Identities = 203/294 (69%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874 |||| ||| ||||||||||| |||||||||| || || | ||||| || ||| Sbjct 6679 GAAACAGCCCACACGCACGATGATCTGTGGAACGCAGCCCAGCTGCAGCTAGTAAAGGAG 6620 Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934 | |||||||| || |||||||||| ||| |||||||| | || ||| | || Sbjct 6619 GCCAAGATGCACGGGTTCCTGCGCATGTACTGGGCGAAGAAAATACTAGAGTGGAC-GAA 6561 Query 37935 GATGCTC-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGG 37993 | || | || |||||| | ||||| ||||| || ||| ||||| |||| || Sbjct 6560 AACGCCCGAGGAAGCGCTCGAAACGGCCATCTATCTGAACGATCGCTACAGTCTGGATGG 6501 Query 37994 GCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGC 38053 ||| ||||| || || |||||||| || ||||||| || ||| | || ||| | Sbjct 6500 GCGCGATCCGAATGGATACGTCGGGTGCATGTGGTCGATCGCCGGCATCCATGATCAGGG 6441 Query 38054 CTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 ||| ||| ||||| ||||| ||||| |||||||||||| |||| || Sbjct 6440 ATGGAAGGAGCGGGACATTTTTGGCAAAATTCGCTACATGAACTACGACGGCTG 6387 >seq5408 Length=43822 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || |||||||||||||| || ||||||||| || |||||||| | Sbjct 36916 ACCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGA 36975 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || | || |||| ||||||||||| || || || |||||||||||| ||| Sbjct 36976 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGG 37035 Query 34020 CACGCTCTCTTTGTCC 34035 | | ||| |||||| Sbjct 37036 GATACCCTCCTTGTCC 37051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396961870500748