Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1711 91.5 3e-13 >seq1711 Length=9628 Score = 91.5 bits (100), Expect = 3e-13 Identities = 251/382 (66%), Gaps = 2/382 (1%) Strand=Plus/Minus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||| ||||| |||| || | ||||| || ||| |||| || || | ||||| || Sbjct 4620 CCAGGCGTCCACGTCCGAACTCTATGGCAAGGTGGTCGAAACGCCGCAAAACGAAAAAAC 4561 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTA 68523 ||| || ||||| || || |||| |||| || || |||||| || ||||| | Sbjct 4560 TCCATTCTATCCGCGCTCACCGTACGCGTGT-GCGAAAATGTACGGCTACTGGATAGTGA 4502 Query 68524 AAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGA 68583 || || || || |||| ||||||| || |||||| ||| ||||| ||||| Sbjct 4501 TCAACTATCGCGAAGCGTACAACATGTTTGCCTGCAACGGTATTCTCTTCAACCACGAAT 4442 Query 68584 GTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTT 68643 ||| | || | | || ||||| || |||||||| ||| ||||| |||| Sbjct 4441 CGCCCCGGCGGGGTGAGAACTTTGTGACACGCAAAATCACTCGCTCGGTGGCGAAGATTT 4382 Query 68644 TCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGAT 68703 || | | ||| | | || |||||| | ||| | || | || ||||| Sbjct 4381 CGCTCGGCCAGCAGGAGTGCGTCGAGCTGGGTAATCTCGATTCGAAGCGCGACTGGGGCC 4322 Query 68704 ATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACT 68763 | ||||| || ||||| |||||||||||||||||| |||| || | ||||| || | Sbjct 4321 ACGCGAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGCAGAAGCAGCCGGAAGATT 4262 Query 68764 ATGTGATTGCAACAGGGAAAAC 68785 || ||||| || || |||| Sbjct 4261 TCGTCATTGCTACGGGCGAAAC 4240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102586449876900