Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq15712 114 2e-20 seq1711 89.7 6e-13 >seq15712 Length=12775 Score = 114 bits (126), Expect = 2e-20 Identities = 204/292 (70%), Gaps = 8/292 (3%) Strand=Plus/Plus Query 171881 GTGAAGATGTACCTCGTTTGAGACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTG 171939 |||||||||||||| | | ||| ||| ||||||||| | | ||||| ||||| || Sbjct 3388 GTGAAGATGTACCTAGGGCTGG-CGCTATCCTTGCCACCCGTCAACCGCGTACCAAACTG 3446 Query 171940 ACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 171999 ||| | ||| | || || ||||| ||||| || | ||||| | |||| |||| Sbjct 3447 ACCGCCCGGATACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 3506 Query 172000 AATCGTATCCGCG-AGGGAGACT--TCACCGTGATGGTAGGCCGACTTGTCCGCGACATA 172056 ||||| || | || | |||| || ||||||||||| || ||| | ||||| || | Sbjct 3507 GATCGT---CGAGCAGAGCGACTGCTCGCCGTGATGGTAAGCGGACATTTCCGCCACCGA 3563 Query 172057 CGCCGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 172116 |||||||||| |||||||||| ||| |||| ||| | |||||||| | ||| Sbjct 3564 ACCCGCCAACTGGGCCACCTTCACCTCGCGCTTGTCGTTACGCTTGAAGCACGTAAACAG 3623 Query 172117 GACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 172168 ||||| | ||| ||||| || ||||| |||| || ||| || ||| Sbjct 3624 CACCTTCCGCTGGCCCGGCTTCAGCCCGTCCAGCATGCACGGGATCGAGCGC 3675 >seq1711 Length=9628 Score = 89.7 bits (98), Expect = 6e-13 Identities = 183/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 8673 TTTGCGTGCTCCGGTATTCTCTTCAACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTG 8732 ||||| ||| ||||||||||||||||||||| || ||||| || || | | || ||| Sbjct 4475 TTTGCCTGCAACGGTATTCTCTTCAACCACGAATCGCCCCGGCGGGGTGAGAACTTTGTG 4416 Query 8733 ACAAAGAAGATCAC-CGAT-GGTATCAAACAAATCGTCGCGGGTGAGAGGGAGTTCATTG 8790 ||| || ||||| || | ||| | || | ||| | | || || ||||| | | | Sbjct 4415 ACACGCAAAATCACTCGCTCGGTGGCGAAGATTTCG-CTC-GGCCAGCAGGAGTGCGTCG 4358 Query 8791 AATTGGGGAACCTCAACGCCGAGAGGGACTGGGGACACGCCAAGGACTATGTTGAAGCCA 8850 | |||| || ||| | | || | |||||||| ||||| || ||||| || ||||| | Sbjct 4357 AGCTGGGTAATCTCGATTCGAAGCGCGACTGGGGCCACGCGAAAGACTACGTCGAAGCAA 4298 Query 8851 TGTGGCTCGTACTTCAACAAGAAG-AGGCGGACGAATATGTCGTCGCGACGGGGGAGACA 8909 ||||| | | | || | ||||| || |||| || | ||| | || ||||| || || Sbjct 4297 TGTGGTTGATGATGCAGC-AGAAGCAGCCGGAAGATTTCGTCATTGCTACGGGCGAAACG 4239 Query 8910 CACTCCGTCAGGGAGTTCGTTGAG 8933 || || || | || || || ||| Sbjct 4238 CATTCGGTGCGAGAATTTGTCGAG 4215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597198482203920