Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3577 170 2e-37 seq5408 114 1e-20 seq5576 105 7e-18 seq3192 96.9 3e-15 seq4173 87.8 2e-12 >seq3577 Length=7701 Score = 170 bits (188), Expect = 2e-37 Identities = 492/745 (66%), Gaps = 14/745 (2%) Strand=Plus/Plus Query 153671 TTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCC 153730 |||||| || || || ||| |||| ||||||| || || |||||||| |||||||| Sbjct 5701 TTTGTCGACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAATAGTACATGCC 5760 Query 153731 GGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAA--TAACGCGAAACTG 153788 || |||||||| ||||| | ||| | ||| | | || ||| | || || | || Sbjct 5761 AGTCTTCAAACCCATCTTCCACGCGTGAAAGTGGAT-CGAGGTAAGTTTAC-CGTAGTTG 5818 Query 153789 GGCTGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCC 153848 || | || | | ||| ||||| ||| ||| |||||||| || || ||||||||| Sbjct 5819 GGTTCGGCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCACGATCGGCC 5878 Query 153849 GCCATGTCAAT-CAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAAT 153907 ||||| | || || ||||| || | || ||||| || |||||||| | | | Sbjct 5879 GCCATTTGGATGCACGTTTTGACCGAA-ATCTCCCAAACCGTTTTGTACAGATCGCGCAC 5937 Query 153908 GTCGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCG 153967 ||| | ||||| ||||| ||||| | || | ||| | || | || Sbjct 5938 GTCCTTTGGTATTTTCTCAATCTTCTGGATCGATCCGTTGTGCGCCAGGATTGTGTTCTT 5997 Query 153968 CATGTGGTCGTCGTACAAATTTAGTCGACATAAA-TCTTCAACCAAGTGCTGGTTAATTA 154026 ||| | ||||| ||| | || | | || | | || || ||||| | | Sbjct 5998 CATTTCATCGTCCCACAGCCCGTG-CGCGGTCAGGTCCTTGATCAGATGATGGTTCACAA 6056 Query 154027 CTTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACG 154086 | ||||| ||||| | | || || || || | || ||| |||||||||| | Sbjct 6057 CCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGCTCGAAAG 6116 Query 154087 ATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAG 154146 | ||||||||||| ||||||||||| || | ||||| ||||| || | || || | Sbjct 6117 ACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAGTG 6176 Query 154147 AGTTTCGCAAACCGTGTTTTGCAATGCGCAATT--TTAAAT-CTGCCCAATTCCACAAGT 154203 |||| || | || |||||||| || | || || ||| | ||||||||||||| || Sbjct 6177 AGTTACGAATCCCATGTTTTGCGAT---CTTTTCCTTCAATGCCGCCCAATTCCACAGGT 6233 Query 154204 TGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGACTGTCAC 154263 || |||| | ||||||||||||||| |||| || ||| || |||||| | Sbjct 6234 CCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTTACCGGACAACCTT 6293 Query 154264 TATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACGCCGCAT 154323 || | ||||||||| | | ||||| ||||| || ||||| |||||| ||| Sbjct 6294 CGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCGCAGCTAGCTTCCAACGCCCCAT 6353 Query 154324 AGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTTCGTACGGCA 154383 |||| | |||||| ||||| | || | | ||| |||| ||||| |||||||| | Sbjct 6354 AGTAGATGGTTTCAAATATTTGCTGATTGAGCTTTTGCGCTTGCTCACTCTCGTACGGAA 6413 Query 154384 ATCCCAATATACAAAAAGCATCGGC 154408 | |||| | | || |||||||| Sbjct 6414 AGCCCATCAAAATGAACGCATCGGC 6438 Score = 136 bits (150), Expect = 4e-27 Identities = 506/779 (65%), Gaps = 27/779 (3%) Strand=Plus/Plus Query 154662 ATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTAC 154721 |||||||| | ||||| ||| || |||| ||||| || || ||||||| |||||| Sbjct 6695 ATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTAC 6754 Query 154722 GGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAA--ACAGACTTCGCGCCTCAA 154779 || |||||||||||| || | || || || || || ||||| | |||||| | Sbjct 6755 GGTACGCCCGTTTCCACCTGTGACTCGATGAT--CGCAAACCACAGATCTTGCGCCTTCA 6812 Query 154780 CTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAACTCTAAAC 154839 |||||| |||| ||| || ||| || |||||| || || |||||| | Sbjct 6813 CTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAACTCTTCGC 6872 Query 154840 TGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTTTT 154899 || || | ||| ||||||||| || || |||||||| ||||||||| || Sbjct 6873 CCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTCATTCG 6932 Query 154900 GTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCT 154959 | || || ||||| |||| |||||| | ||| | |||||| |||| || || || Sbjct 6933 CCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAGAACATGTCGCGAGCGC 6992 Query 154960 TTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTGCC 155019 || || ||| ||||| ||| | || || ||| ||| | | || |||||| Sbjct 6993 GAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCGTGCC 7052 Query 155020 ACGGCTCTAAATATACGGCCATCGCGCCTTTGCG---TTTTCCTCCTTGATCCACGTGAC 155076 |||| || | || | || | ||||||| || || || || ||||| |||| | Sbjct 7053 ACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGTACC 7112 Query 155077 GCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGC 155136 | | || |||||||| || | || ||| ||| ||| | | | ||||| || | Sbjct 7113 GTGCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCGTAC 7172 Query 155137 C----ACGTATCGCGCTGCCGCGAGCACGCGCTTTA-TGAACATTAACGCCCAAACCTCC 155191 | | ||| || | || ||||| | | | || ||||| | || | ||| || Sbjct 7173 CGGAGATGTA-CG---TTCCCTTCGCACG-GATGCAGTGCACATTCAGCCCGATACCACC 7227 Query 155192 GCCGTATTT--AGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTG 155249 | | |||| |||| ||||||| | | ||| || ||||| || || | |||||| Sbjct 7228 GGCCGATTTGGAGATCAATGCGCAC--TGCTTCAATGTATCGTAGATACCGTCGATGCTA 7285 Query 155250 TCTTCTTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCA 155309 || || || ||||| || || || || || | ||||| | || | | |||||| Sbjct 7286 TCGTCCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCA 7345 Query 155310 AATAATGTAGGACTAGCGTGTGTAAACATTTTGTTGGCGGTTA--AG-TTGTAAGTTTCG 155366 || | || ||| ||||| ||||| | | | | | | || ||||| || ||| Sbjct 7346 AACATGGTCGGAGAGGCGTGGGTAAA-GTAACGCT--CCGAAAGCAGATTGTACGTCTCG 7402 Query 155367 ATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTG 155425 || || || |||||||| ||||| || ||||| || || ||||||| ||| || || Sbjct 7403 ATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTG 7461 >seq5408 Length=43822 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | |||||| ||||||| ||||| || || || || |||||||| | Sbjct 36916 ACCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGA 36975 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || |||||||||||||| | ||||| |||||||| || || || Sbjct 36976 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGG 37035 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| ||| | ||||| || || || Sbjct 37036 GATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 37095 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||| || || | ||||| ||||| || ||||| || Sbjct 37096 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 37146 >seq5576 Length=36905 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || ||||| || |||| || || || || || || ||||| || | Sbjct 18787 ACCACCACGGAGTCGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGA 18728 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | ||||| |||||||| ||||| | || || |||||||| || ||||| Sbjct 18727 CAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 18668 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| ||| || | || || || || || Sbjct 18667 GATGCCTTCCTTATCCTGAATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGAC 18608 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||||||| | ||||| |||||||| ||||| Sbjct 18607 CTCAAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 18560 >seq3192 Length=14073 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | | ||||| |||| || |||||||||||| Sbjct 197 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCG 138 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || |||||||| || ||||| ||||| || || || || || || ||| Sbjct 137 GCGAAGATCAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 78 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | ||||| | || || || | ||| | ||||||||| |||| || Sbjct 77 ACATTCTCGATCGTATCCGATGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTC 18 Query 64427 TTTACGAAAAT 64437 || ||||| || Sbjct 17 TTCACGAAGAT 7 >seq4173 Length=11039 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 64225 CAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCG 64284 ||||| ||||| ||||| ||||||||| | | || ||||| ||||||| || | || Sbjct 8487 CAATCGCAGCACCAGATGCATCGTCGATCCATGCTGGATGTTATAATCTGAGATAATTCG 8428 Query 64285 CGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTC 64344 | || | ||||||||||| ||| | |||| ||||| |||||||| | |||||||| Sbjct 8427 ATCATCGTTCAGCTGCTTGCCAGCAAAGATGATACGCTGTTGGTCGGGCGCTATTCCTTC 8368 Query 64345 TTTTTCTTGTATTTTTTGCTTT 64366 ||| | || ||||||||| Sbjct 8367 GCGTTCCTCTA--TTTTGCTTT 8348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499515054736560