Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3577 158 1e-33 >seq3577 Length=7701 Score = 158 bits (174), Expect = 1e-33 Identities = 1036/1654 (63%), Gaps = 61/1654 (4%) Strand=Plus/Minus Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792 || ||||| |||||| ||||| | | ||||| | || | | || ||| | ||| Sbjct 7521 TTTAAAACGCTGGAGCGATCGTATTTGTTGAAGATAAAGGGAAAGATTGTGGAGAGGCCG 7462 Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACAT-------GC---C 93842 || || || ||||||| ||||||||||| || |||||| | ||||| || | Sbjct 7461 CAGCATATGTTGATGCGTGTCGCCATCGGCATCCACGGCGAGGACATTGAGGCAGCGATC 7402 Query 93843 GA-ATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGA 93901 || | || |||||| ||| || || | |||| ||| | |||| Sbjct 7401 GAGACGTACAATCTGCTTTCGGAG-----CGTTAC------TTTACCCACGCCTCTCCGA 7353 Query 93902 CCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACA 93961 || |||| |||| |||| | || ||| | || || || || ||| |||||| Sbjct 7352 CCATGTTTGCGGCGGCCACCCAGCGTCCTCAGCTTTCGTCTTGCTTTCTGCTGACGATGT 7293 Query 93962 AGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAAT 94021 || ||| |||| ||| || | ||| | | ||| | || || ||||| |||| Sbjct 7292 CGGACGATAGCATCGACGGTATCTACGATACATTGAAGCAGTGCGCATTGATCTCCAAAT 7233 Query 94022 ACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCG 94081 || || || |||||| | | ||| ||| | | ||||| | ||| | |||||| || Sbjct 7232 CGGCCGGTGGTATCGGGCTGAATGTGCACTGCATCCGTGCGAAGGGAACGTACATCTCCG 7173 Query 94082 GTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGC 94141 |||| || || | || ||||| | || || ||||| || || | ||||||| |||| | Sbjct 7172 GTACGAACGGTATTTCGAACGGGTTGGTACCGATGCTACGTGTGTACAACAACACGGCAC 7113 Query 94142 GCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCT 94201 | ||||| || ||||| ||| | | || || | || || |||| ||||| || | Sbjct 7112 GGTACGTTGATCAGGGCGGTAATAAGCGGCCAGGCGCGTTTGCTATCTACCTCGAACCGT 7053 Query 94202 GGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA 94261 |||||| || ||| | || | || ||| || ||| |||||| || || Sbjct 7052 GGCACGGTGATGTGTTTGAGTTTCTGGATCTGAAGAAAAACACCGGCAAGGAGGAGGTTC 6993 Query 94262 GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGA 94321 | || | ||| | ||||||||||||||| | || || || || ||||| || || ||| Sbjct 6992 GCGCTCGCGACATGTTCTACGCTCTCTGGATACCGGATCTGTTCATGAAGCGTGTGGAGG 6933 Query 94322 AAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTG 94381 || |||||| | | || || | || ||||||||| || |||| || ||| Sbjct 6932 CGAATGAAATGTGGAGTTTGATGTGCCCGCACGACTGTCCCGGATTGGCCGA--TTCGTG 6875 Query 94382 GATCG--CGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA---GGAA 94436 | || || || | |||| | ||||||| | || | | | | | Sbjct 6874 GGGCGAAGAGTTCGAGAAGCTGTACACGGGTTACGAGGCAGAGTGTCGGTTTATACGTCA 6815 Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTAC 94496 || | || || || | |||||| | |||| | || ||||||||| ||||| Sbjct 6814 AGTGAAGG-CGCAAG--ATCTGTGGTTTGCGATCATCGAGTCACAGGTGGAAACGGGCGT 6758 Query 94497 GCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556 || ||||| ||| |||||| | ||| ||| ||||||||| || |||| Sbjct 6757 ACCGTACATGCTGTACAAGGATGCGTGCAATCGCAAAAGCAACCAGCAAAACATCGGCAC 6698 Query 94557 GATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGC 94616 |||||| | ||||| || ||||| ||||| || ||||| | || |||||| | || Sbjct 6697 CATCAAGTGTTCGAACCTTTGCACTGAGATAGTGGAGTACTCGTCGAAGGACGAAGTGGC 6638 Query 94617 TGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTAC 94676 ||||| || ||| ||| || || || || || || | || Sbjct 6637 CGTGTGCAATTTGGCCTCGATTGCGTTGAACATGTTTGT--------CCAGCCCG----A 6590 Query 94677 TGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTG---AACCT 94733 | | ||| |||| | || |||| | | |||| | ||| || | || || Sbjct 6589 TCGTACGTACGATTTCAAGAAGCTGAAGGAGGTCGC---CAAGATCGTAACGCGCAATCT 6533 Query 94734 GAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAA 94793 |||| | | || ||| ||||| |||||| || ||||| ||| | ||| ||| || Sbjct 6532 TAACAAGATCATTGACGTGAACTACTACCCGGTGCCGGAAGCGAAACGCTCGAACATGCG 6473 Query 94794 GCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCT 94853 || || || ||||||||||| ||||||||| | || || ||| | | ||||| | | Sbjct 6472 CCACCGTCCGATCGGCATCGGTGTCCAGGGTATGGCCGATGCGTTCATTTTGATGGGCTT 6413 Query 94854 GCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTA 94913 || ||||| || | ||| | ||| | | ||||| |||| ||| || || Sbjct 6412 TCCGTACGAGAGTGAGCAAGCGCAAAAGCTCAATCAGCAAATATTTGAAACCATCTACTA 6353 Query 94914 CGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCGT 94972 ||||| | ||| | | | | | | |||||| | | | ||||| |||| ||| Sbjct 6352 TGGGGCGTTGGAAGCTAGCTG-CGAATTGGCC---GCCAAGGATGGGCCGTACGAGACGT 6297 Query 94973 TCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCT 95032 | || | || | |||||||| | |||| |||| | ||| | | || Sbjct 6296 ACGAAGGTTGTCCGGTAAGCAAGGGCATTCTGCAGTACGACATGTGGAACAAGGAACCGA 6237 Query 95033 CGGGTCTGTACGACTGGGAAGC--TCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 ||| |||| | |||| || | | | ||| | ||||| || | || Sbjct 6236 CGGACCTGTGGAATTGGGCGGCATTGAAGGAAAAGATCGCA--AAACATGGGATTCGTAA 6179 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | | ||||| | || || ||||| || || || || || || || | ||||||||||| Sbjct 6178 CTCACTGCTGCTAGCACCGATGCCAACAGCTTCGACTGCTCAAATATTGGGCAACAACGA 6119 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 ||| ||||| || | ||| || ||||| |||||| | || ||||| | || || || | Sbjct 6118 GTCTTTCGAGCCGTACACGTCGAACGTCTACAACCGACGAGTGCTTTCGGGCGAGTTTCA 6059 Query 95211 CGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGT 95270 || | ||| | || || | ||||||||| | | || |||||| || | | Sbjct 6058 GGTTGTGAACCATCATCTGATCAAGGACCTGACCGCGCACGGGCTGTGGGACGATGAAAT 5999 Query 95271 CAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGG 95329 |||||| | | || |||| |||||| || ||||||| || | ||||||| ||| Sbjct 5998 GAAGAACACAATCCT-GGCGCACAACGGATCGATCCAGAAGATTGAGAAAATACCAAAGG 5940 Query 95330 ACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 || | | || ||||| || || |||||||| Sbjct 5939 ACGTGCGCGATCTGTACAAAACGGTTTGGGAGAT 5906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494594732753040