Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3577 398 8e-106 seq17361 149 6e-31 seq3192 84.2 2e-11 >seq3577 Length=7701 Score = 398 bits (440), Expect = 8e-106 Identities = 1228/1870 (66%), Gaps = 66/1870 (4%) Strand=Plus/Plus Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCG-CCACGAGTAATT 152770 || ||||| ||||||||||| |||||||| || || | || || | ||||| || | Sbjct 5732 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACC-CATCTTCCACGCGTGAAA 5790 Query 152771 GTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCT 152830 ||| ||||| || | | |||| | |||| |||||| | || ||||||||| Sbjct 5791 GTGGATCGAGGTAAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGA 5850 Query 152831 CTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAAT-CATGCGTTTTG-CCTTCATC 152888 ||| || ||||| || ||| ||||||||||| | || || ||||||| || ||| Sbjct 5851 CTGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCA--CGTTTTGACCGAAATC 5908 Query 152889 TCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATA 152948 ||||| | |||||||||| || ||| | ||||| ||||| ||||| || Sbjct 5909 TCCCAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCAATCTTCTGGATC 5968 Query 152949 GAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCAGTTTAATG 153008 || || ||||| || | || | ||| ||||| ||| ||| | || | Sbjct 5969 GATCCGTTGTGCGCCAGGATTGTGTTCTTCATTTCAT-CGTCC-CACAGCCCGTGCGCGG 6026 Query 153009 --AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCA 153066 ||||| | ||||| | ||||| || || ||||||||||||| | |||||||| Sbjct 6027 TCAGGTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGT 6086 Query 153067 AATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGG 153126 || || || ||| | || || || || ||||| ||||| | ||||||||| || | Sbjct 6087 TGTAGACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCG 6146 Query 153127 TTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGT 153186 || || ||||| || | || || || || || | || || | || | | Sbjct 6147 AAGCTGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTT 6206 Query 153187 CCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA 153246 ||||||| ||| ||||| |||||| ||| |||| | |||||||||||||||||| | Sbjct 6207 CCTTCAATGCCGCCCAATTCCACAGGTCCGTCGGTTCCTTGTTCCACATGTCGTACTGCA 6266 Query 153247 ACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCC 153305 | || || | |||| || | |||| ||| || || | | | |||| Sbjct 6267 GAATGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATC-CTTGGCGGCC 6325 Query 153306 AGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA 153365 | |||||||||||| || | ||| |||||||| |||||||| ||||| | |||||| Sbjct 6326 AATTCGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGATTGAGC 6385 Query 153366 ACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCC 153425 ||||| || ||||||||||| | || || || | || || ||||||| |||| Sbjct 6386 TTTTGCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCC 6445 Query 153426 TGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGA 153485 |||| ||||| |||||| || || || | ||| ||| |||| || | || Sbjct 6446 TGGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCACCGGG 6505 Query 153486 TAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTA 153545 |||| || || || || ||||| || |||||| || | || | | | |||| Sbjct 6506 TAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTC 6565 Query 153546 AGTTTCTCGAAATCATAGGTCATTTCG---TCGACGCGTACGCATCGATTCACGGCAATA 153602 || |||| |||||| || || ||| | ||| | ||| |||| ||||| Sbjct 6566 AGCTTCTTGAAATCGTACGTACGATCGGGCTGGAC----AAACATG--TTCAACGCAATC 6619 Query 153603 GACGCCAGATTACAGACGGCC-----GTCTCTTCGGCGTCGCTGTACTGCACGATCTCGG 153657 || |||| ||| || |||||| ||| ||||| || ||||| ||| ||||| | Sbjct 6620 GAGGCCAAATTGCACACGGCCACTTCGTC-CTTCGACGA----GTACTCCACTATCTCAG 6674 Query 153658 CGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACG 153717 ||| ||||| || || ||| ||| | |||||||| ||||||||||||||||||| Sbjct 6675 TGCAAAGGTTCGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACG 6734 Query 153718 CGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACC 153774 | || ||| | |||||||||||| |||| || || || || | |||| ||| ||||| Sbjct 6735 CATCCTTGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACC 6794 Query 153775 TATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGT 153834 ||| || ||||| ||| | | | | || | ||| |||||| | | || Sbjct 6795 ---ACAGATCTTGCGCCTTCACTTGACGTATAAACCGACACTCTGCCTCGTAACCCGTGT 6851 Query 153835 ACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACA 153894 |||| ||| ||||| ||||| | | ||||| | |||||||| | ||||| |||| Sbjct 6852 ACAGCTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACA 6911 Query 153895 TCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCG 153954 ||| |||||| || | || | || || ||||||||||||||| | |||||| | Sbjct 6912 TCAAACTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCAGAGAG 6971 Query 153955 CGTACATGAGGTCGCGCGCCTTGCAA---TCCTCCGCGCCCATGTTGCGTTTCAGATTGA 154011 |||| | | |||||| || || | |||||| ||| |||| ||||||| | Sbjct 6972 CGTAGAACATGTCGCGAGC---GCGAACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCA 7028 Query 154012 GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC- 154070 | | | | | || ||||||| ||||| | ||||| || | || ||| ||| Sbjct 7029 GAAACTCAAACACATCACCGTGCCACGGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCT 7088 Query 154071 --TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCA 154128 || ||||||||||| |||| || || | |||||| | || || | ||| ||| ||| Sbjct 7089 TATTACCGCCCTGATCAACGTACCGTGCCGTGTTGTTGTACACACGTAGCATCGGTACCA 7148 Query 154129 GGCCGCTTGCGGTGCCGTTGGT--CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATG 154186 ||| | | | ||||| || || | ||| | | || || || | || Sbjct 7149 ACCCGTTCGAAATACCGTTCGTACCGGA--GATGTACGTTCCCTTCGCACGGATGCAGTG 7206 Query 154187 CACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCT 154246 ||| || | || || || ||| | | || || || ||||| | || || Sbjct 7207 CACATTCAGCCCGATACCACCGGCCGATTTGGAGATCAATGCGCACTGCTTCAATGTATC 7266 Query 154247 GTAGATGCCGTCGATGCTATCGTCGCGGACGCCG--AGCAAGAAACACGAACACATTTGC 154304 |||||| |||||||||||||||| | ||| || |||| || || || | | || Sbjct 7267 GTAGATACCGTCGATGCTATCGT--CCGACATCGTCAGCAGAAAGCAAGACGAAAGCTGA 7324 Query 154305 GGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTC 154364 ||| | || |||||| ||| | ||| ||| ||||| ||||| | |||| Sbjct 7325 GGACGCTGGGTGGCCGCCGCAAACATGGTCGGAGAGGCGTGGGTAAA----GTAACGCTC 7380 Query 154365 ----ATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGC 154420 | || |||||| ||||| || | || || || |||||||| ||||||| || Sbjct 7381 CGAAAGCAGATTGTACGTCTCGATCGCTGCCTCAATGTCCTCGCCGTGGATGCCGATGGC 7440 Query 154421 GACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTAT-TGTCAATCTTCAAGAGAT 154479 ||| ||||| | ||| |||||||| | || | | ||| | | |||||||| | || Sbjct 7441 GACACGCATCAACATATGCTGCGGCCTCTCCAC-AATCTTTCCCTTTATCTTCAACAAAT 7499 Query 154480 ATCCAT-TTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCG 154538 | | || || || ||||| |||||||||| || || |||| || | || | | | Sbjct 7500 A-CGATCGCTCCAGCGTTTTAAAACCGAAATAGTTATACCCAAAGTCACGATCGTAAATG 7558 Query 154539 ATGGCCGCAT 154548 ||||||| || Sbjct 7559 ATGGCCGAAT 7568 >seq17361 Length=8649 Score = 149 bits (164), Expect = 6e-31 Identities = 471/711 (66%), Gaps = 18/711 (3%) Strand=Plus/Minus Query 52029 TGGAAGGTGGAGGAGGTTGATATGTCGAGGGACTATGAC-GACTTTGAGTCTAAATTAAA 52087 |||| ||||| ||||| || |||||| |||| |||| |||| || || | ||| Sbjct 1220 TGGACAGTGGAAGAGGTGGACCTGTCGAAGGAC-ATGAAAGACTGGGAATCGC--TCAAA 1164 Query 52088 CGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCAT 52147 | | |||||| | || ||| |||||| | || |||||||||||| | || | || Sbjct 1163 CCGAG-CGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCGCCGCCTCGGACGGTAT 1105 Query 52148 CGTGAACATTAACCTCATCGAGTACATGCAGCG-GAACGTTCCGGAACTCGAGGCGCAAT 52206 ||| ||| || || | ||| | | |||| | | || | || ||||| | | Sbjct 1104 CGTAAACGAGAATCTGGTGGAGCGCTT-CAGCCAGGAGGTGCAGGTGACGGAGGCCCGCT 1046 Query 52207 ACTTTTATAATTTGCA-AGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTC 52265 ||| || || || | ||| || ||| |||||||| || |||||| ||||| Sbjct 1045 GCTTCTACGGGTTTCAGATTGCG-ATGGAGAACGTGCACAGTGAAATGTACTCGCTGCTG 987 Query 52266 ATTGAGCAGCTGATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCAC 52325 || || | ||| || | ||||||| || ||| | || ||| |||| || Sbjct 986 ATCGACACGTACATACGCGACCCGAACGAGCGGGAGTATCTGTTCAACGCGATCGAA-AC 928 Query 52326 G-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGC 52384 | | |||||||| || ||||| | ||||| |||| |||||| ||| | | || Sbjct 927 GCTACCGTGCGTCAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGC 868 Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444 || | | ||||| |||| |||||||| || |||||| | || || ||||| Sbjct 867 CAACTTCGGGGAGCGTGTGGTTGCCTTCGCTGCCGTTGAGGGCATTTTCTTCAGTGGCAG 808 Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504 |||||| || ||||| | | || | | ||| ||||||| || ||||||||| ||| Sbjct 807 CTTTGCGGCTATCTTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTCCAA 748 Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGAC 52564 |||| |||| ||||||||||| ||||||||| |||||||| ||||| | | | Sbjct 747 CGAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCCTGCCTGATGTTCCGGTA 688 Query 52565 GCGCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGCGGTGG 52623 | ||| | ||| | | ||| | || | ||| || || || ||||| | Sbjct 687 TCTGGTG---CAGAAACCGTCTAAGGAGCGCGTGACGGAG-ATCATCCGCGATGCGGTCG 632 Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAAC-GCG 52682 ||||| ||||||| | || |||||||||||||| |||| ||||||||| ||| Sbjct 631 TGATCGAGCAGGAGTTCCTCACCAAGGCGCTGCCGGTCGACATGCTCGGCATGAACTGCG 572 Query 52683 CAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 | | |||| ||||||||||||| || |||||||| || || || || Sbjct 571 AACT-GATGTCGCAGTACATCGAGTTCGTCGCGGATCGGTTGCTGCTGGAG 522 >seq3192 Length=14073 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | |||||||| || |||||||||||| | Sbjct 227 CCACCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 168 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||| || || || |||| |||| |||||||| || || ||||| Sbjct 167 AGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGG 108 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | || || | | ||| ||| Sbjct 107 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTATCCGATGGCTCGACC 48 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613 || | || | || || |||||||| || || || || |||| || Sbjct 47 TCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTCCA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496133533061280