Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3577 223 3e-53 seq5408 127 2e-24 seq5576 122 8e-23 seq3192 107 2e-18 seq4173 86.0 6e-12 seq17361 82.4 7e-11 >seq3577 Length=7701 Score = 223 bits (246), Expect = 3e-53 Identities = 1191/1867 (64%), Gaps = 77/1867 (4%) Strand=Plus/Plus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 |||||| |||||||| |||| | ||||||| || ||||||| |||||||||||| || Sbjct 5704 GTCGACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAATAGTACATGCCAGT 5763 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGGT 145836 ||| | ||| ||||| || |||||| || | | | |||| || ||||| Sbjct 5764 CTTCAAACCCATCTTCCACGCGTGAAAGTGGATCGAGGTAAGTTTACCG--TAGTTGGGT 5821 Query 145837 TCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCC 145896 ||||| || | || | |||||| ||| || ||||| | | || ||||| ||| Sbjct 5822 TCGGCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCACGATCGGCCGCC 5881 Query 145897 ATGTCTATCATGCAC--TTTGATTTAATT-TCCCATGCGGTTTTAAAGAGATCCTTGACG 145953 || | || |||| ||||| || | ||||| | ||||| | ||||| ||| Sbjct 5882 ATTTGGAT---GCACGTTTTGACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACG 5938 Query 145954 TGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGC 146013 | || ||||||| ||||| ||||| | || || || | |||| ||| |||| | Sbjct 5939 TCCTTTGGTATTTTCTCAATCTTCTGGATCGATCCGTTGTGCGCCAGGATTGTGTTCTTC 5998 Query 146014 AATTCTGGAGTGTAAATGTTCAAGTCTACG---AGGGCCTTGATGAGATACTGGTTGACC 146070 | ||| || | | | || || ||| ||||||| |||| ||||| || Sbjct 5999 ATTTCATC-GTCCCACAGCCC--GTGCGCGGTCAGGTCCTTGATCAGATGATGGTTCACA 6055 Query 146071 ACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAAC 146130 |||||||||||||| | || || || | || ||||| ||| |||||||||| Sbjct 6056 ACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGCTCGAAA 6115 Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAA 146190 ||||||||||| || | ||| || || |||| ||| || ||||| || | ||||| Sbjct 6116 GACTCGTTGTTGCCCAATATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAGT 6175 Query 146191 GAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAATGA 146250 ||||| | | || ||| || ||||||||| | | | ||||||||||| | Sbjct 6176 GAGTTACGAATCCCATGTTTTGCGATCTTTTCCTTCAATGCCGCCCAATTCCACA---GG 6232 Query 146251 TCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGGGGGCTATTC 146310 ||||| || | | || | ||||||| |||| | |||| | | || | | Sbjct 6233 TCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTTACCGGACAACCT 6292 Query 146311 TCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCCAGAGCCGAA 146370 ||||||| || || || || || | ||||| ||||||||||||||||| ||| | Sbjct 6293 TCGTACGTCTCGTACGGCCCATCCTTGGCGGCCAATTCGCAGCTAGCTTCCAACGCCCCA 6352 Query 146371 AAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCCTCCTCGCTGTCGTAGGG 146429 |||| ||||| || || | |||| ||| || || | ||| || ||||| || Sbjct 6353 TAGTAGATGGTTTCAAATATTTGCTGATTGA-GCTTTTGCGCTTGCTCACTCTCGTACGG 6411 Query 146430 GATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGGGCGGTG 146489 | | | | | || || ||||| | |||||| | |||| || | || ||||| Sbjct 6412 AAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCGATCGGACGGTG 6471 Query 146490 TTTCTTGTT---ACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGATGATCTT 146546 | |||| | ||||| || ||| ||| |||| ||| ||| |||||||| Sbjct 6472 GCGCATGTTCGAGCGTTTCGC--TTCCGGCACCGGG-TAGTAGTTCACGTCAATGATCTT 6528 Query 146547 GTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACATAGTCAAATGTTTT 146606 ||| ||||| ||| || || || | | ||||| | | | |||| | Sbjct 6529 GTTAAGATTGCGCGTTACGATCTTGGCGACCTCCTTCAG-----CTTCTTGAAAT-CGTA 6582 Query 146607 AGTTTTAACG---TTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGT 146663 || | || | ||| || |||| | || || |||||||| || || ||||| Sbjct 6583 CGTACGATCGGGCTGGACAAACATGTTCAACGCAATCGAGGCCAAATTGCACACGGCCAC 6642 Query 146664 CTCGTCCTT-GTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGC 146722 |||||||| | || | |||| ||| ||||| | ||| ||||| ||||||||| ||| Sbjct 6643 TTCGTCCTTCGACG-AGTACTCCACTATCTCAGTGCAAAGGTTCGAACACTTGATGGTGC 6701 Query 146723 CCAAAtttttttGGTTACTAAACTTG---TTGCAGGGGTCCTTGTAGAGCATGTACGGTC 146779 | | |||| ||||| || ||| ||||| | |||||||| |||||||||||| Sbjct 6702 CGATGTTTTGCTGGTTGCT---TTTGCGATTGCACGCATCCTTGTACAGCATGTACGGTA 6758 Query 146780 CCCCGGTTTCGACATTGGTCTCGACGAT--GAATCTAAACAAATCTCTGGCCTTTACTTG 146837 | || ||||| || | | ||||| ||| || | ||| |||| ||||| ||||| Sbjct 6759 CGCCCGTTTCCACCTGTGACTCGATGATCGCAAAC--CACAGATCTTGCGCCTTCACTTG 6816 Query 146838 TCTTTCGTACAGTTTATTCT-TTTCGTATTTCTCGTACAATATTTCAAAACTAGAACCGT 146896 | | || | | ||| ||||| | ||||| | || || || Sbjct 6817 ACGTATAAACCG-ACACTCTGCCTCGTAACCCGTGTACAGCTTCTCGAACTCTTCGCCCC 6875 Query 146897 ACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCT 146956 || ||| | |||||| | | | || || | || ||| || |||| ||| Sbjct 6876 ACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACATTTCATTCGCCT 6935 Query 146957 TCACGCGTTCCATAAACAAATCGGGAATCCAAAG-GCCCAGCATCAAGTCGCGAGCCTTG 147015 ||| || | ||| |||| ||| || ||||| || || || | || ||||||||| Sbjct 6936 CCACACGCTTCATGAACAGATCCGGTATCCAGAGAGCGTAG-AACATGTCGCGAGCGCGA 6994 Query 147016 GCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGCCAA 147075 | ||||| ||| |||| ||| | || | || | | || ||||| Sbjct 6995 ACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAGAAACTCAAACACATCACCGTGCCAC 7054 Query 147076 GGCTCCACGTATGCGGCGAGTGCGCCTTTTCGC---TTACCGCCCTGATCGACGTGGCGC 147132 || || | ||| || | |||||| ||| |||||||||||||| |||| || Sbjct 7055 GGTTCGAGGTAGATAGCAAACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGTACCGT 7114 Query 147133 ACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGA------TTTTGTGGTG 147186 || |||| ||| | || |||| ||| | || | ||| || || || | Sbjct 7115 GCCGTGTTGTTGTACACACGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCGTACCG 7174 Query 147187 CCGTTGTA------TTGAGCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAGA 147240 | |||| | || | || || ||||| ||||||||| ||| ||| || Sbjct 7175 GAGATGTACGTTCCCTTCGCACGGATGCAGTGCACATTCAGCCCGATACCACCGGCCGAT 7234 Query 147241 TTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTG 147300 || || ||||| ||| ||| | ||| || | |||||| ||||||||||| || ||| Sbjct 7235 TTGGAGATCAATGCGCACTGCTTCAATGTATCGTAGATACCGTCGATGCTATCGTCCGAC 7294 Query 147301 ATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTG 147360 || |||| || || || | | || ||||| ||| |||||||||||| || Sbjct 7295 ATCGTCAGCAGAAAGCAAGACGAAAGCTGAGGACGCTGGGTGGCCGCCGCAAACATGGTC 7354 Query 147361 GGGCTGGCGTGCGTGAACGT---GCCCAGACTCATCA-ATTGATACGTTTCAATGGCGCT 147416 || |||||| || || || || | || | || |||| ||||| || || || Sbjct 7355 GGAGAGGCGTGGGT-AAAGTAACGCTCCGA--AAGCAGATTG-TACGTCTCGATCGCTGC 7410 Query 147417 CATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTC 147476 | || ||| |||||||| ||| | | |||||| ||||| | ||| ||||| || | || Sbjct 7411 CTCAATGTCCTCGCCGTGGATGCCGATGGCGACACGCATCAACATATGCTGCGGCCTCTC 7470 Query 147477 CGCAATCACGTCATTGACTTTTAATAGATATCCATTGGT-CAGAGTTTTGAAACCAAAGT 147535 | ||||| | || | || || | ||| | || | | ||| ||||| ||||| || | Sbjct 7471 CACAATCTTTCCCTTTATCTTCAACAAATA-CGATCGCTCCAGCGTTTTAAAACCGAAAT 7529 Query 147536 ACTTGTA 147542 | || || Sbjct 7530 AGTTATA 7536 >seq5408 Length=43822 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || |||||||| | || | ||||| ||| | || ||||| || || |||||||||||| Sbjct 36914 GCACCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCG 36973 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || |||||| ||| || ||||| || || ||| |||| | ||||||||||| || Sbjct 36974 GACAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGC 37033 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| ||| ||| | | |||| || |||| |||| Sbjct 37034 GGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCG 37093 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||| | || || || || || ||||| || || |||||||| Sbjct 37094 ACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37143 >seq5576 Length=36905 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||||| || | || ||||| || || |||||||| || | Sbjct 18786 CCACCACGGAGTCGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGAC 18727 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| ||||| ||| |||||| ||||||||||| ||||| Sbjct 18726 AGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 18667 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||| ||| || || ||| | | ||||| ||||||| |||||| Sbjct 18666 ATGCCTTCCTTATCCTGAATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACC 18607 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || |||||||| || ||||| || ||||||||||| Sbjct 18606 TCAAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 18560 >seq3192 Length=14073 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 228 TCCACCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGA 169 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || ||||| || || ||||| || || ||| |||||| ||||||||||| ||||| Sbjct 168 CAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGG 109 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| | |||| || |||| |||||| Sbjct 108 GATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTATCCGATGGCTCGAC 49 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 127112 || | || | || ||||| ||||| || || || || |||| || Sbjct 48 CTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTCCA 2 >seq4173 Length=11039 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/223 (70%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 ||||||| ||||| ||| ||||| || | | || || || ||||| || | ||| Sbjct 8486 AATCGCAGCACCAGATGCATCGTCGATCCATGCTGGATGTTATAATCTGAGATAATTCGA 8427 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||||| ||||| || ||||| |||| | ||||| || ||||| | ||| || || Sbjct 8426 TCATCGTTCAGCTGCTTGCCAGCAAAGATGATACGCTGTTGGTCGGGCGCTATTCCTTCG 8367 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGT-TCG-ACGGTGTCCGTACTC--TCGACTTCGAC 127071 ||| ||||| |||| | ||| | | || || | || || | || || |||| Sbjct 8366 CGTTCCTCTATTTT--GCTTTTGATGTCTAGCACCGTTTGCG-ACCCGATC-ACATCGAG 8311 Query 127072 GGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| | |||||| ||||| |||||||| ||||||||||||||| Sbjct 8310 GGTAATCGTTTTCCCGGTTAGAGTTTTCACAAAAATCTGCATG 8268 >seq17361 Length=8649 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 47136 GAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCG 47195 || ||| || | || ||||| ||| |||||| | |||||| |||||||||||||| Sbjct 857 GAGCGTGTGGTTGCCTTCGCTGCCGTTGAGGGCATTTTCTTCAGTGGCAGCTTTGCGGCT 798 Query 47196 ATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATC 47255 || || | |||| | || | ||||| || || ||||| ||||||||| ||| Sbjct 797 ATCTTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTCCAACGAGCTGATC 738 Query 47256 TCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT 47293 ||| | ||||| || |||||| |||||||||| || Sbjct 737 TCGCGCGACGAGGGACTGCACTGTGACTTTGCCTGCCT 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475377324329760