Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3577 241 1e-58 >seq3577 Length=7701 Score = 241 bits (266), Expect = 1e-58 Identities = 923/1435 (64%), Gaps = 32/1435 (2%) Strand=Plus/Minus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 || |||||| | ||||| ||||| || ||| | ||||| ||||| || |||| | Sbjct 7461 CAGCATATGTTGATGCGTGTCGCCATCGGCATCCACGGCGAGGACATTGAGGCAGCGATC 7402 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 || || ||| || || | || | | || || ||||| ||| || |||| || Sbjct 7401 GAGACGTACAATCTGCTTTCGGAGCGTTACTTTACCCACGCCTCTCCGACCATGTTTGCG 7342 Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095 || | ||| || |||||| | || || || ||| |||| || || || || ||| Sbjct 7341 GCGGCCACCCAGCGTCCTCAGCTTTCGTCTTGCTTTCTGCTGACGATGTCGGACGATAGC 7282 Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGC 123155 ||| ||||||||| || || ||| | ||||| ||||| ||||||| | ||| || Sbjct 7281 ATCGACGGTATCTACGATACATTGAAGCAGTGCGCATTGATCTCCAAATCGGCCGGTGGT 7222 Query 123156 ATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGA 123215 || || |||| |||||| | | | | |||| |||| | || |||| Sbjct 7221 ATCGGGCTGAATGTGCACTGCATCCGTGCGAAGGGAACGTACATCTCCGGTACGAACGGT 7162 Query 123216 ATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGAC 123275 || | |||| | | | | ||||| || || ||||| ||| | | ||| |||| || Sbjct 7161 ATTTCGAACGGGTTGGTACCGATGCTACGTGTGTACAACAACACGGCACGGTACGTTGAT 7102 Query 123276 CAGGGCGGCAAA---CGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGAT 123332 |||||||| || || ||||||| | || ||||| || ||||||||||||| |||| Sbjct 7101 CAGGGCGGTAATAAGCGGCCAGGCGCGTTTGCTATCTACCTCGAACCGTGGCACGGTGAT 7042 Query 123333 GTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGAT 123392 |||| || ||| | || | || |||| || ||| || || ||||| Sbjct 7041 GTGTTTGAGTTTCTGGATCTGAAGAAAAACACCGGCAAGGAGGAGGTTCGCGCTCGCGAC 6982 Query 123393 TTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTG 123452 |||| |||||| | ||| |||| ||| |||| ||| || || | | | | || Sbjct 6981 ATGTTCTACGCTCTCTGGATACCGGATCTGTTCATGAAGCGTGTGGAGGCGAATGAAATG 6922 Query 123453 TGGTCGCTCATGTGTCCCGATCGG-TGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTT 123511 ||| | ||||| |||| || |||||||| ||| ||| | ||| | |||| Sbjct 6921 TGGAGTTTGATGTG-CCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGGCGAAGAGTT 6863 Query 123512 TGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTA---GTCAGGTTCCGGC 123568 || || ||||| || |||||| || | | | ||| |||| || ||| Sbjct 6862 CGAGAAGCTGTACACGGGTTACGAGGCAGAGTGT---CGGTTTATACGTCAAGTGAAGGC 6806 Query 123569 ACGTGATTTGTTCAAATTT---ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACAT 123625 | ||| ||| ||| || ||||| |||| || ||||| || |||||||| Sbjct 6805 GCAAGATCTGTGG---TTTGCGATCATCGAGTCACAGGTGGAAACGGGCGTACCGTACAT 6749 Query 123626 GCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATG 123685 ||| ||||| || || ||||| | |||| ||| ||| ||| | || || || || || Sbjct 6748 GCTGTACAAGGATGCGTGCAATCGCAAAAGCAACCAGCAAAACATCGGCACCATCAAGTG 6689 Query 123686 TAGTAATCTTTGCTCCGAAATTATCGAATACAG--CGATGCCGATCAAGTGGCCGTGTGT 123743 | || |||||| | || || | || ||| ||| | || ||||||||||||| Sbjct 6688 TTCGAACCTTTGCACTGAGATAGTGGAGTACTCGTCGAAG--GACGAAGTGGCCGTGTGC 6631 Query 123744 AATTTGGCTTCGATTTGCGTGAATCGT-TGCGTCGAAAACGG-CGCTTTTA--ATTTCCA 123799 |||||||| |||||| |||| | | | | ||| | || || || ||||| | Sbjct 6630 AATTTGGCCTCGATT-GCGTTGAACATGTTTGTCCAGCCCGATCGTACGTACGATTTCAA 6572 Query 123800 AACGCTCAAACGCATAACAAAAACTGTAGTAAAG---AATTTGAACAAAATTATCGATGT 123856 | ||| || | | || | | |||| | ||| | ||||| || || || || Sbjct 6571 GAAGCTGAAGGAGGTCGCCAAGA---TCGTAACGCGCAATCTTAACAAGATCATTGACGT 6515 Query 123857 TAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGT 123916 || | || || || ||||||| || || || ||| | ||| |||| | Sbjct 6514 GAACTACTACCCGGTGCCGGAAGCGAAACGCTCGAACATGCGCCACCGTCCGATCGGCAT 6455 Query 123917 GGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGA 123976 || | || || ||||||| ||||| | || || || | |||||||| || || | Sbjct 6454 CGGTGTCCAGGGTATGGCCGATGCGTTCATTTTGATGGGCTTTCCGTACGAGAGTGAGCA 6395 Query 123977 AGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAG 124036 ||| | ||| ||| ||||||| ||||| || || || || || ||||| || || Sbjct 6394 AGCGCAAAAGCTCAATCAGCAAATATTTGAAACCATCTACTATGGGGCGTTGGAAGCTAG 6335 Query 124037 CTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCG 124096 ||||||| | || | | || ||||||| | |||| || | |||| ||| Sbjct 6334 CTGCGAATTGGCCGCCAAGGATGGGCCGTACGAGACGTACGAAGGTTGTCCGGTAAGCAA 6275 Query 124097 AGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGT 124156 || ||| ||||||||||||||||||| |||||| | ||||| | ||| | Sbjct 6274 GGGCATTCTGCAGTACGACATGTGGAACAAGGAACCGACGGACCTGTGGAATTGGGCGGC 6215 Query 124157 TTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCC 124216 || || || || | | || || | |||||||| ||| || | || ||||| Sbjct 6214 ATTGAAGGAAAAGATCGCAAAACATGGGATTCGTAACTCACTGCTGCTAGCACCGATGCC 6155 Query 124217 GACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAA 124276 || || | ||||||||||| || || |||||||| || |||||||||| ||| || Sbjct 6154 AACAGCTTCGACTGCTCAAATATTGGGCAACAACGAGTCTTTCGAGCCGTACACGTCGAA 6095 Query 124277 TTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATTTG 124331 | ||| ||||||||| | | ||||| ||||| || | || |||||| || Sbjct 6094 CGTCTACAACCGACGAGTGCTTTCGGGCGAGTTTCAGGTTGTGAACCATCATCTG 6040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451885826069040