Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq15712 116 5e-21 seq1711 87.8 2e-12 >seq15712 Length=12775 Score = 116 bits (128), Expect = 5e-21 Identities = 191/270 (71%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 175901 GTGAAGATGTACCTCGTTTGAGACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTG 175959 |||||||||||||| | | ||| ||| ||||||||| | | ||||| ||||| || Sbjct 3388 GTGAAGATGTACCTAGGGCTGG-CGCTATCCTTGCCACCCGTCAACCGCGTACCAAACTG 3446 Query 175960 ACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGAC 176019 ||| | || | || || ||||| ||||| ||| | |||| | ||||| |||| Sbjct 3447 ACCGCCCGGATACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 3506 Query 176020 AATCGTATCCGCG-AGGGAGACT--TCACCGTGATGGTAGGCCGACTTGTCCGCCACATA 176076 ||||| || | || | |||| || ||||||||||| || ||| | |||||||| | Sbjct 3507 GATCGT---CGAGCAGAGCGACTGCTCGCCGTGATGGTAAGCGGACATTTCCGCCACCGA 3563 Query 176077 CGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 176136 |||||||||| |||||||||| ||| |||| ||| | |||||||| | ||| Sbjct 3564 ACCCGCCAACTGGGCCACCTTCACCTCGCGCTTGTCGTTACGCTTGAAGCACGTAAACAG 3623 Query 176137 GACCTTTCTCTGTGAAGGCTTGAGGCCGTC 176166 ||||| | ||| ||||| || ||||| Sbjct 3624 CACCTTCCGCTGGCCCGGCTTCAGCCCGTC 3653 >seq1711 Length=9628 Score = 87.8 bits (96), Expect = 2e-12 Identities = 203/300 (68%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 10552 TGGCTCGTGAAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTC 10611 ||| | |||| || ||||||||| | || | |||| ||| ||||||||||||| Sbjct 4511 TGGATAGTGATCAACTATCGCGAAGCGTACAACATGTTTGCCTGCAACGGTATTCTCTTC 4452 Query 10612 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGAT-GGTA 10669 |||||||| || ||||| || || | | || |||||| || ||||| || | ||| Sbjct 4451 AACCACGAATCGCCCCGGCGGGGTGAGAACTTTGTGACACGCAAAATCACTCGCTCGGTG 4392 Query 10670 TCAAACAAATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGA 10729 | || | || | || || ||||| | | || |||| || ||| | | || Sbjct 4391 GCGAAGATTTC--GCTCGGCCAGCAGGAGTGCGTCGAGCTGGGTAATCTCGATTCGAAGC 4334 Query 10730 GGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAG 10789 | |||||||| ||||| || ||||| || ||||| |||||| | | | || | ||||| Sbjct 4333 GCGACTGGGGCCACGCGAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGC-AGAAG 4275 Query 10790 -AGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848 || |||| || | ||| | || ||||| || || || || || | || || || ||| Sbjct 4274 CAGCCGGAAGATTTCGTCATTGCTACGGGCGAAACGCATTCGGTGCGAGAATTTGTCGAG 4215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613347887517840