Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3192 138 1e-27 seq5408 125 8e-24 seq5576 95.1 1e-14 >seq3192 Length=14073 Score = 138 bits (152), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || |||||| ||||| ||||||||||| |||||||| |||| || Sbjct 209 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCC 150 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| |||| |||||||| || | || | | |||||||||| | Sbjct 149 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGG 90 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCCACCGTGATGGTT 46561 ||||| ||||| || | | ||| || |||| || || |||| |||||||| Sbjct 89 ATCTTGGCCTTGACATTCTCGATCGTATC---CGATGGCTCGACCTCCAGAGTGATGGTC 33 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGAT 46587 ||||| |||||||| || || ||||| Sbjct 32 TTGCCAGTCAGCGTCTTCACGAAGAT 7 >seq5408 Length=43822 Score = 125 bits (138), Expect = 8e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || |||||| ||||||||||| ||||| || ||||| | || || Sbjct 36934 CACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGGCCATCCTC 36993 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | |||||||| || | ||| | | |||||||||| Sbjct 36994 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTG 37053 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||||| ||| | || | | ||| || | || || || | || ||||| || Sbjct 37054 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 37113 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600 ||||| || ||||| || ||||| ||||| ||| || Sbjct 37114 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAAC 37150 >seq5576 Length=36905 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| |||||||||||||| || || || || | || || Sbjct 18769 CACCAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGGGTACGGCCATCTTC 18710 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| |||||||| |||| |||||||| || | || | || ||||| ||| Sbjct 18709 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCCTG 18650 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||| | | | | |||||| | || || || | |||||||| || Sbjct 18649 AATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGAGTGATGGTCTT 18590 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || ||||| || || || ||||| Sbjct 18589 GCCGGTGAGTGTTTTCACGAAAATCTGCAT 18560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565091621718480