Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq17361 444 6e-120 seq3192 116 4e-21 >seq17361 Length=8649 Score = 444 bits (492), Expect = 6e-120 Identities = 527/709 (74%), Gaps = 4/709 (1%) Strand=Plus/Plus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 |||| || || || |||||||||||||| |||||||| |||||| || | || ||| Sbjct 529 AGCAACCGATCCGCGACGAACTCGATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGC 588 Query 132781 A-GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | | || ||||||||||| | |||||| || |||||||| ||||||| ||| || Sbjct 589 ATGTCG-ACCGGCAGCGCCTTGGTGAGGAACTCCTGCTCGATCACGACCGCATCGCGGAT 647 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899 ||| ||| | |||||| || ||| ||||||| || | |||||||| ||| || Sbjct 648 GATCTCCGTCACGCGCTCCTTAGACGGTTTCTGCACCAGATACCGGAACATCAGGCAGGC 707 Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959 |||||| || |||| |||||||| | || || || |||||| ||| |||| || || Sbjct 708 AAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTGGAGAACGTCAGCCCCGG 767 Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019 ||| |||||||| || || ||||| || || || || || ||||| ||||| | ||| Sbjct 768 CATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCACTGAAGAAAATGCC 827 Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCA 133079 ||| ||||| ||||| || |||| ||||| ||||| |||| | ||||||| |||||| Sbjct 828 CTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAAGTTGGCCTTCTTGCTGGAGATCCA 887 Query 133080 GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAA 133139 | ||||||||| |||||||| | ||||||||||| | ||||||||| ||||| |||| Sbjct 888 GTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTTCGATCGCGTTGAACAG 947 Query 133140 ACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGA 133199 | ||| | || | || | ||| |||||||| || ||| |||||||| Sbjct 948 ATACTCCCGCTCGTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCACT 1007 Query 133200 GTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCAC 133259 ||| ||||||||||| || || ||||| ||||| ||||| || ||||| ||||||||| Sbjct 1008 GTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTGCAC 1067 Query 133260 TTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAA 133319 || || ||| ||||| |||||||| ||||| ||||| ||||| ||||||||| || Sbjct 1068 CTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGAGGCGGCGAAGAA 1127 Query 133320 GGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGCG 133378 ||| || |||||| |||||| || |||||| | ||| |||| |||||||| | Sbjct 1128 GGCAAGTACGTGCGAGATGAAGTGACGCTCGCT-CGGTTTGAGCGATTCCCAGTCTTTCA 1186 Query 133379 TGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| |||||||||||||| || || ||||| || || || || || Sbjct 1187 TGTCCTTCGACAGGTCCACCTCTTCCACTGTCCAGAAGGAAGCTTCCGC 1235 >seq3192 Length=14073 Score = 116 bits (128), Expect = 4e-21 Identities = 164/225 (73%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG---AC 38306 || ||||| || ||||| || ||||| |||||||| | || |||||| ||| || || Sbjct 7 ATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAG-CCATCGGATAC 65 Query 38307 -AGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACA 38365 | || | || | | || | || |||| ||||| |||||||| || | || || || Sbjct 66 GATCGAG--AATG-TCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCAGATCAGCA 122 Query 38366 GCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 38425 ||| || || | ||| ||||| |||||||| |||| ||||| || |||||||||||| Sbjct 123 GCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAACAT 182 Query 38426 CCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| ||||| |||| |||| ||||| || ||| || | || || Sbjct 183 CCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGCGGTGG 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500042917628160