Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq15712 95.1 2e-14 seq17361 91.5 2e-13 >seq15712 Length=12775 Score = 95.1 bits (104), Expect = 2e-14 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 176911 CTTCCCACGAAGAGGGAAGACACCGTA-GTGATCGCGACCAACCACAGAGAGACCCGCAA 176969 ||| || || || || || |||||||| ||| |||||||| ||||| || |||| | Sbjct 4347 CTTACCGCGCAGCGGAAACACACCGTACGTG-TCGCGACCGACCACCCCCAGCCCCGACA 4405 Query 176970 CCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTG 177029 | || | |||||| || || || ||||| |||| |||||| ||||| ||| || | || Sbjct 4406 CGGCCAACGTTTTGGCCGAGTCTCCCTCGGTCAGGATGAGCGTACAGTTGAGCGAAT-TG 4464 Query 177030 C-CGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAATTTTGGACTTTCGC 177088 | || ||| || | |||||| || |||| || || || || |||| || ||||| | Sbjct 4465 CGCGAACCGGCATCGTTCGCGTCCTCCAGCTTCGGGATGCCCTTAATCTTCGACTTCTTC 4524 Query 177089 GTACCGTCAGATTTTGAGAGTTCCTTCATCTCCTTAAACTTTG 177131 | ||| | ||| | || ||| || | |||||||||||| Sbjct 4525 GAGCCGGACGTTTTGGCCAGATCCGTCTGCGCCTTAAACTTTG 4567 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 176020 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 176079 |||||| |||||| | | ||||||||||||||||| | ||| | || || ||||| || Sbjct 3414 ATCCTTGCCACCCGTCAACCGCGTACCAAACTGACCGCCCGGATACAGCAGGTTGATGTT 3473 Query 176080 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCG-AGAGAGACT--TC 176136 ||| || | ||||| | ||||| |||| ||||| || | |||| |||| || Sbjct 3474 GTTGCTGCCGACGTAGTTCTGCGCCAGGTTGATGATCGT---CGAGCAGAGCGACTGCTC 3530 Query 176137 ACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTC 176196 ||||| ||||| || | | || || || | |||||||||| ||||| |||| ||| Sbjct 3531 GCCGTGATGGTAAGCGGACATTTCCGCCACCGAACCCGCCAACTGGGCCACCTTCACCTC 3590 >seq17361 Length=8649 Score = 91.5 bits (100), Expect = 2e-13 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 102262 |||||||| || |||||| ||| ||| |||| |||| | ||||| |||||||| || Sbjct 833 GTTGAGGGCATTTTCTTCAGTGGCAGCTT-TGCGGCTATCTTCTGGCTGAAGAAGCGCGG 775 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 102322 || ||||| || || |||||||||||||| ||||| || ||||||||||| ||| Sbjct 774 CCTAATGCCGGGGCTGACGTTCTCCAACGAGCTGATCTCGCGCGACGAGGGACTGCACTG 715 Query 102323 AGAGTTTGC 102331 || ||||| Sbjct 714 TGACTTTGC 706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620581208717280