Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3577 107 2e-18 >seq3577 Length=7701 Score = 107 bits (118), Expect = 2e-18 Identities = 504/787 (64%), Gaps = 25/787 (3%) Strand=Plus/Plus Query 105875 AGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA 105934 || || |||| ||||| | ||| |||| | |||||| |||| || || || Sbjct 6029 AGGTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTG 6088 Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||| ||||| |||||| || || || | || || || ||||| ||||| || || || Sbjct 6089 TAGACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGAA 6148 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||||||||| ||||| | || || |||||||| || | || ||| |||| Sbjct 6149 GCTGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTCC 6208 Query 106055 TTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 || | | |||| | | || | | | |||| | |||| |||| || | || | Sbjct 6209 TTCAATGCCGCCCAATTCCACAGGTCCG-TCGGTTCCTTGTTCC-ACATGTCGTACTGCA 6266 Query 106113 GCAC-CCCTTGGG-ACGTGGGAGAACCCTCAAATGTCTCATAGG----AACCTTGGGCTT 106166 | | |||||| || ||| |||| || | ||||| || | | |||||| Sbjct 6267 GAATGCCCTTGCTTACC--GGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGG---- 6320 Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 | |||||||| ||||| || |||| | | | || ||||||||||| || | || Sbjct 6321 CGGCCAATTCGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTGCTGAT 6380 Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 106286 | | || | |||| || || | | ||| |||||| || |||| || | Sbjct 6381 TGAGCTTTTGCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCA 6440 Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC--TTTCGCG-CAGTCT 106343 ||| || ||||| | || || || | ||| ||||| || || |||||| | | | Sbjct 6441 TACCCTGGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTTCGCTTCCGGCA 6500 Query 106344 CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 | |||| || | || |||||||| ||| ||||| || || ||||| | || Sbjct 6501 C--CGGG-TAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGATCTTGGCGA 6557 Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 106463 || | || || | |||| | || ||| || | |||| || | | | Sbjct 6558 CCTCCTTCAGCTTCTTGAAATCGTACGTACGA---TCGGGCTGGACAAACATGTTCAACG 6614 Query 106464 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 106523 | || || ||||||||||| || ||| || ||||| | |||||| | || || | Sbjct 6615 CAATCGAGGCCAAATTGCACACGGCCACTTCGTCCTTCGACGAGTACTCCACTATCTCAG 6674 Query 106524 TACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583 | || | ||| |||| ||| || || || | || | ||||| || || ||||||| Sbjct 6675 TGCAAAGGTTCGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACG 6734 Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCC 106643 |||||||||| |||||||| || ||||| ||| |||||||| || || || || Sbjct 6735 CATCCTTGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAACC 6794 Query 106644 ACACATC 106650 ||| ||| Sbjct 6795 ACAGATC 6801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589827596735760