Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq9376 104 2e-16 >seq9376 Length=11840 Score = 104 bits (114), Expect = 2e-16 Identities = 179/257 (70%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | || || || || || ||||| || || | || | || || |||||| Sbjct 9372 GGTATTGATCTGGGCACGACCTACAGCTGTGTCGGAGTGTTCCAGCACGGCAAGGTTGAA 9431 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 ||||||||||| || || |||||| | || || || || ||||| | ||||| || || Sbjct 9432 ATTATTGCCAACGACCAGGGTAACCGTACCACCCCGTCGTATGTGGCCTTCACTGACACC 9491 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATACT 550174 || | | | |||| ||||| || || |||| ||||| || || || ||||| || Sbjct 9492 GAGCGTCTGATTGGCGATGCCGCCAAGAATCAGGTAGCCA-TG--AACCCGACCAACACC 9548 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 || || || || || ||| | ||||| | | || | ||| | | | ||||| || Sbjct 9549 ATCTTCGACGCAAAGCGTCTGATTGGCCGTAAGTTCGACGATCCCGCCATCCAGGCTGAC 9608 Query 550235 ATGAAGCATTGGCCTTT 550251 |||||||| ||||| || Sbjct 9609 ATGAAGCACTGGCCGTT 9625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028197377189260