Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq4838 84.2 2e-11 >seq4838 Length=6282 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || ||||| || || ||||| | || || || |||||||| |||||||| || ||| Sbjct 468 AGTCCAGTGACATGCGCGATCATATGGGTAAGCAGCGAGTAGCTTGCGATGTTGAATGGT 527 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || | |||| ||| |||| | || || | ||| || || | ||||||| Sbjct 528 ACACCCAAGCCCACGTCGGCCGATCGTTGATACATCTGGCATGATAATTCTCCGTTATCA 587 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048 || |||| ||| || | || || || ||||||||||| | | || | || Sbjct 588 ACAAAAAATTGAGCCAAGCAATGACAAGGTGGAAGAGCCATATTGGGGATATCGGTCGGA 647 Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 30089 |||||||||| || |||||| || | || | |||||||| Sbjct 648 TTCCAGGCGCTCATGATGATTCGACGATCGTACGGGTTGTT 688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408514144919102