Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq8736 105 9e-18 >seq8736 Length=19884 Score = 105 bits (116), Expect = 9e-18 Identities = 180/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081 || |||||| || || || ||||||||||| || || | | |||| || || || Sbjct 6288 CAAATCCTCATCCGAGAACCCGGTACCGATCTTGCAGATCGTCTGGTACTCCTCATTTTC 6347 Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTT 197141 | | |||||||||||||| |||| | ||||| ||||| || | || ||| || Sbjct 6348 GTCGTCGTAACAGGCGAGTAGGAAACCACCGTACGTTCCGGTACGTTTACCCCTTCCTCG 6407 Query 197142 GAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTT 197201 | |||| |||||||| |||||||| || | |||| ||| || | || |||||||| Sbjct 6408 GTAGCCACCGATAACGACCAGATCGAGCGAATCGCCCACTCCCGATAGATAGTCTTTCTT 6467 Query 197202 CAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGT 197261 ||| || | ||| | | |||| || ||||| ||||| ||||| | | | || || Sbjct 6468 CAGCTTCAACCAATTGCGTGATCGTTTCGCAATTTCGTACGTTGCCTCACGGACGAGCGT 6527 Query 197262 CTTGATCATCAATCCCTCGCA 197282 || | ||| | |||||||| Sbjct 6528 TTTCACCATGAGGCCCTCGCA 6548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676553870241120