Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq17361 282 8e-71 seq3577 230 4e-55 seq17915 104 4e-17 >seq17361 Length=8649 Score = 282 bits (312), Expect = 8e-71 Identities = 486/705 (69%), Gaps = 3/705 (0%) Strand=Plus/Plus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| ||||||||||| |||||||||| | ||||| || | ||||||||| | Sbjct 528 CAGCAACCGATCCGCGACGAACTCGATGTACTGCGACATCAGTTCGCAGTTCATGCCGAG 587 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | | || |||| ||||| ||||| ||||||| ||| ||| || || || | | Sbjct 588 CATGTCGACCGGCAGCGCCTTGGTGAGGAACTCCTGCTCGATCACGACCGCATCGCGGAT 647 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 |||| | | ||||| || || ||||| | ||| | | | | | || ||| Sbjct 648 GATCTCCGTCACGCGCTCCTTAGACGGTTTCTGCACCAGATACCGGA---ACATCAGGCA 704 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||||||||| | ||||| || ||||| || ||| ||| |||||||||| || || Sbjct 705 GGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTGGAGAACGTCAGCCC 764 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||| | || | || || |||||||| || ||||| || |||| |||||| || Sbjct 765 CGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATAGCCGCAAAGCTGCCACTGAAGAAAAT 824 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 |||||| || || ||||| || | | ||| ||||| || |||||| ||||| Sbjct 825 GCCCTCAACGGCAGCGAAGGCAACCACACGCTCCCCGAAGTTGGCCTTCTTGCTGGAGAT 884 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 |||| ||||||||||| ||||||||||||| ||| || | ||| || || || ||| Sbjct 885 CCAGTTCAGCGCCCAGTCGGCCTTCTTCTTGACGCACGGTAGCGTTTCGATCGCGTTGAA 944 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432 || | || | ||| | ||| | || || || |||| | |||||| || Sbjct 945 CAGATACTCCCGCTCGTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTC 1004 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 | |||||| ||||| || || ||||| |||||||||||| | |||||| |||||| Sbjct 1005 ACTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTG 1064 Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 ||| || | ||| | ||||| ||||||||| || || || || || || || || || Sbjct 1065 CACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTTACGATACCGTCCGAGGCGGCGAA 1124 Query 48553 GAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTG 48612 ||||||||| || || | ||| || |||||| | | |||| | | |||| | | Sbjct 1125 GAAGGCAAGTACGTGCGAGATGAAGTGACGCTCGCTCGGTTTGAGCGATTCCCAGTCTTT 1184 Query 48613 TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 | ||| || ||||||||| |||||||| ||||||||||| || Sbjct 1185 CATGTCCTTCGACAGGTCCACCTCTTCCACTGTCCAGAAGGAAGC 1229 >seq3577 Length=7701 Score = 230 bits (254), Expect = 4e-55 Identities = 869/1336 (65%), Gaps = 62/1336 (5%) Strand=Plus/Plus Query 212888 CAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTG 212947 |||| ||||| ||| ||| |||| || | ||| || || || || ||||| | | | Sbjct 6028 CAGGTCCTTGATCAGATGATGGTTCACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTT 6087 Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| || ||||| ||||||| ||||||||| |||| || || ||||| Sbjct 6088 GTAGACGTTCGACGTGTACGGCTCGAAAGACTCGTTGTTGCCCAATATTTGAGCAGTCGA 6147 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG 213067 ||||| ||||| || || | ||| || ||| | | || || | |||| Sbjct 6148 AGCTGTTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATCCCATGTTTTGCGATCTTTTC 6207 Query 213068 CCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCC-TCG--TCCTTCACGTTCCACAT 213124 | | | ||||| | ||| ||||||| ||| ||||| ||||||||| Sbjct 6208 CTTCAATGCCGCCCAATTCCA---------CAGGTCCGTCGGTTCCTT---GTTCCACAT 6255 Query 213125 GTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATG 213184 ||| |||||| ||||| ||||| || || | || | ||| | ||| || |||| Sbjct 6256 GTCGTACTGCAGAATGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATC 6315 Query 213185 CTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTC 213244 || ||||| |||||| || | || || | |||||||||||||||||||| | Sbjct 6316 CTTGGCGGCCAATTCGCAGCTAGCTTCCAACGCCCCATAGTAGATGGTTTCAAATATTTG 6375 Query 213245 CCTGTTGAGCTT-----CTTGGCCTCT-GGGGACGTGAAGGGCATCATCATGCGTTGGAA 213298 | |||||||| |||| | || | ||| ||| ||||| || ||| Sbjct 6376 CTGATTGAGCTTTTGCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAAT------GAA 6429 Query 213299 CACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGG 213357 | |||| |||| |||||||| ||||||||||| || | ||| | || ||| || | | Sbjct 6430 CGCATCGGCCATACCCTGGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGTTT 6489 Query 213358 AGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCA 213417 || ||| || ||||| |||| ||| ||||||||||| || ||||| || | | Sbjct 6490 CGC-TTCCGGCACCGGGTAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGCGTTACGA 6548 Query 213418 CTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACT 213477 |||| ||| | ||| | || | || | ||||| | || ||| |||||| Sbjct 6549 TCTTGGCGACCTCCTTCAGCTTCTTGAAATCG--TACGTA-CGATCGGGCTGGACAAACA 6605 Query 213478 CAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCA---CCTCCTGAGAGTCTGTGTACT 213534 || || || ||||| ||||| ||||||| | |||| || | ||||| Sbjct 6606 TGTTCAACGCAATCGAGGCCAAATTGCACACGGCCACTTCGTCCTTCGA---CGAGTACT 6662 Query 213535 CCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT 213594 ||| ||||| ||||| ||||| || ||||||||| | ||| || ||| ||| | Sbjct 6663 CCACTATCTCAGTGCAAAGGTTCGAACACTTGATGGTGCCGATGTTTTGCTGG-TTGCTT 6721 Query 213595 TTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACC 213653 ||||| | ||| | ||||||||| |||||||| || || || || | ||| ||| | Sbjct 6722 TTGCGATTGCACGCATCCTTGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCG 6781 Query 213654 AGTATCTGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC 213712 | ||| ||| || | | || ||||| ||| | | | | | | || Sbjct 6782 ATGATCGCAAACCACAGAT-CTTGCGCCTT---CACTTGACGTATAAACCGACACTCTGC 6837 Query 213713 CTCGTA--CTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTCCCGG 213769 |||||| | || ||| |||| | ||| || | |||||| || | | ||| ||| || Sbjct 6838 CTCGTAACCCGT--GTACAGCTTCTCGAACTCTTCGCCCCACGAATC-GGCCAATCCGGG 6894 Query 213770 ACAG-GATGCGGGACACATGAGGCTCCA-GTCCCCGTCATCTCTGACTCTCTGCATGAAC 213827 |||| |||||| ||||| | ||||| | | || ||| || | || ||||||| Sbjct 6895 ACAGTCGTGCGGG-CACATCAAACTCCACATTTCATTCGCCTC-CACACGCTTCATGAAC 6952 Query 213828 AGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAG 213887 || ||||| | ||| || ||| ||||| ||| | | | ||| ||| || | | Sbjct 6953 AGATCCGGTATCCAGAGAGCGTAGAACATGTCGCGAGCGCGAACCTCCTCCTTGCCGGTG 7012 Query 213888 TTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCA 213947 ||||| |||||| ||||| ||||| | || |||||||||| || | |||||| ||| Sbjct 7013 TTTTTCTTCAGATCCAGAAACTCAAACACATCACCGTGCCACGGTTCGAGGTAGATAGCA 7072 Query 213948 AAGGCGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATG 214004 || ||||| |||| | || |||||||| || || || ||| ||||| | | Sbjct 7073 AACGCGCCTGGCCGCTTATTACCGCCCTGATCAACGTACCGTGCCGTGTTGTTGTACACA 7132 Query 214005 CGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAG 214064 || || | ||||||| |||||| || ||||| || || | || |||| || Sbjct 7133 CGTAGCATCGGTACCAACCCGTTCGAAATACCGTTCGTACCGGAGATGTACGTTCCCTTC 7192 Query 214065 GCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGC 214122 || | | | ||| ||| ||||| || |||||||| | |||||||||| |||| Sbjct 7193 GCACGGATGCAGTGCACAT--TCAGCCCGATACCACCGGCCGATTTGGAGATCAATGCGC 7250 Query 214123 AGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGC 214182 | || ||| || || ||| ||| | ||||| || || | | |||||| |||| Sbjct 7251 ACTGCTTCAATGTATCGTAGATACCGTCGATGCTATCGTCCGACATCGTCAGCAGAAAGC 7310 Query 214183 AGCTCGAGAGCTGGGG 214198 | ||| ||||| || Sbjct 7311 AAGACGAAAGCTGAGG 7326 >seq17915 Length=3697 Score = 104 bits (114), Expect = 4e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 ||| ||| ||||||| || ||||||||| || ||| ||||| || || ||||| ||||| Sbjct 3336 CTTCAGCTCCTTCACCTTGTCCTCCAGCTTCGAGATCCGTTCGAGCTTCCGCCGCCGGCA 3277 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| ||| |||| || || || || | ||| || || ||||||||| ||||| Sbjct 3276 CTTGGAGGCGGCCACCCGATTTCGCAGCCGCTTCCGCTCGAGCTTGATGCGCTCCTGCGA 3217 Query 241609 CTCCATGTCGATCGG 241623 ||||||||||||||| Sbjct 3216 CTCCATGTCGATCGG 3202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931290904220160