Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq17361 221 2e-52 >seq17361 Length=8649 Score = 221 bits (244), Expect = 2e-52 Identities = 423/615 (69%), Gaps = 15/615 (2%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCC 25569 |||||| | |||||| | || ||| | ||||||||| | | |||| | ||||| | || Sbjct 1221 CTGGACAGTGGAAGAGGTGGACCTGTCGAAGGACATGAAAGACTGGGAATCGCTCAAACC 1162 Query 25570 AAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629 | ||||| || || || | |||| | || ||||| || ||||| || ||||| Sbjct 1161 GAG--CGAGCGTCACTTCATCTCGCACGTACTTGCCTTCTTCGCCGCCTCGGACGGTATC 1104 Query 25630 GTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT 25689 || |||||||||||| ||| | |||| | ||| |||||| ||||||| || Sbjct 1103 GTAAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGGTGACGGAGGCCCGCTGC 1044 Query 25690 TTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTG 25749 |||||||| || ||||| || || || || |||||| ||| |||| | ||| ||| Sbjct 1043 TTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGTGAAATGTACTC---GCTGCTG 987 Query 25750 ATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC 25806 || |||||||| ||| |||| | || ||||| || ||||| Sbjct 986 ATCGACACGTACATACGCGACCCGAACGAGCGGGAGTATCTGTTCAACGCGATCGAAACG 927 Query 25807 ATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT 25866 |||| || |||||| |||||| ||||| |||| |||||| |||| ||| || Sbjct 926 CTACCGTGCGTCAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGCC 867 Query 25867 ACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCG 25926 | || || ||||| |||| ||||| ||||| || |||||||| || ||||| || Sbjct 866 AACTTCGGGGAGCGTGTGGTTGCCTTCGCTGCCGTTGAGGGCATTTTCTTCAGTGGCAGC 807 Query 25927 TTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAAC 25986 |||||||| ||||||||||| ||| || || ||||| |||||| || |||||| Sbjct 806 TTTGCGGCTATCTTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTCCAAC 747 Query 25987 GAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGC 26046 ||||| ||| | |||||||| || ||| | || |||||||||||| | | | ||| Sbjct 746 GAGCTGATCTCGCGCGACGAGGGACTGCACTGTGACTTTGCCTGCCTGATGTTC-CGG-- 690 Query 26047 CACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAG-TATCATCAAAGAGGCTGTGGA 26105 | || | || ||||| ||| | ||| ||| || | |||||| || || || | Sbjct 689 TATCTGGTGCAGAAACCGTCTAAGGAGCGCGT-GACGGAGATCATCCGCGATGCGGTCGT 631 Query 26106 GATCGAGAAGGAGTT 26120 ||||||| ||||||| Sbjct 630 GATCGAGCAGGAGTT 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928603602226560