Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1711 147 3e-30 >seq1711 Length=9628 Score = 147 bits (162), Expect = 3e-30 Identities = 350/522 (67%), Gaps = 8/522 (2%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTT-CTTCTTGTTGAAGCATTAACCACATAGCCTC 47846 || || ||||| || ||||| || || | ||||| | || | ||| |||||||| || || Sbjct 4246 CCCGTAGCAATGACGAAATCTTCCGGCTGCTTCT-GCTGCATCATCAACCACATTGCTTC 4304 Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 ||| || ||| | || || |||||||| || | ||| ||||| || || | | || Sbjct 4305 GACGTAGTCTTTCGCGTGGCCCCAGTCGCGCTTCGAATCGAGATTACCCAGCTCGACGCA 4364 Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAA 47964 || |||| || || || ||| | | | || || || || || ||||| Sbjct 4365 CTCCTGCTGGCCGAGCGAAAT--CTTCGCCACCGAGCGAGTGATTTTGCGTGTCACAAAG 4422 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 | ||||| || | || ||||| || || || |||||||| | |||||| |||| | Sbjct 4423 TTCTCACCCCGCCGGGGCGATTCGTGGTTGAAGAGAATACCGTTGCAGGCAAACATGTTG 4482 Query 48025 TATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACAC-CATAAGG 48083 || | ||| |||||||| | ||||||||||| || || | ||| || |||| | || || Sbjct 4483 TACGCTTCGCGATAGTTGATCACTATCCAGTAGCCGTACATTTTCGC-ACACGCGTACGG 4541 Query 48084 AGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAG 48143 || || |||||||| || || | || | || || || || |||||| ||||| || Sbjct 4542 TGAGCGCGGATAGAATGGAGTTTTTTCGTTTTGCGGCGTTTCGACCACCTTGCCATAGAG 4601 Query 48144 TTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGC 48203 ||| ||||| || || |||| || ||| | | ||| ||| ||||| || Sbjct 4602 TTCGGACGTGGACGCCTGGTAGAAGCGGACCGTCTTCTCCTGTCCAACGGTACGGATGGC 4661 Query 48204 CTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAA 48263 ||||||| | ||| || || | ||||| | | ||||| ||| || || || Sbjct 4662 ATCAAGCAGCCGCAGCGTACCGACCGCATCCACTTCCGCTGTATATTCGCTCAGATCGAA 4721 Query 48264 CGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 ||||| ||| ||||| || || || |||| || || || || Sbjct 4722 CGAAATCTTAACATGGCTTTGGGCGGCAAGGTTGTAGATTTC 4763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665321587741680