Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq15712 89.7 6e-13 >seq15712 Length=12775 Score = 89.7 bits (98), Expect = 6e-13 Identities = 160/227 (70%), Gaps = 14/227 (6%) Strand=Plus/Minus Query 13491 CAAAGTTTAAGGAGATGAGGGAACT---CAAGAAGACCGATGGTGCTCGCA--AGTCCAA 13545 |||||||||||| | || ||| || ||| | | ||| ||||| | |||| || Sbjct 4567 CAAAGTTTAAGGCGCAGACGGATCTGGCCAAAACGTCCG-----GCTCGAAGAAGTCGAA 4513 Query 13546 AATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGA-A 13604 |||| || || || ||| |||| ||||||||| | || ||| || | |||| | | Sbjct 4512 GATTAAGGGCATCCCGAAGCTGGAGGACGCGAACGATGCCGGTTCG-CGCAATTCGCTCA 4454 Query 13605 AGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCT 13664 | ||||| ||||| | || ||||| || ||||| ||||| | || || |||| || Sbjct 4453 ACTGTACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTGGCCGTGTCGGGGCTGG 4394 Query 13665 CTGTCGTTGGTCGTGATCAC-TACGGTGTGTTCCCACTTCGCGGTAA 13710 || || ||||| || ||| ||||||||||| || || |||||||| Sbjct 4393 GGGTGGTCGGTCGCGA-CACGTACGGTGTGTTTCCGCTGCGCGGTAA 4348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596414685789120