Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20punctulatus_20[genbank_20GCA_5F000956255.1_202015-03-19] 20,774 sequences; 146,157,495 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq16597 109 2e-18 seq15509 100 8e-16 >seq16597 Length=28935 Score = 109 bits (120), Expect = 2e-18 Identities = 186/266 (70%), Gaps = 3/266 (1%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| | ||||||||| || ||||| ||| | || || || || ||| Sbjct 16419 TCCATAGCCTTGATCAGACGACGCTGGATGTAACCGGTTTCGGCCGTCTTGACGGCGGTA 16360 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 ||||| | ||| | ||||| |||||||| |||||| | | ||| ||| ||| || || Sbjct 16359 TCAATCAAACCCTCGCGACCGCCCATAGCGTGGAAGTAGAACTCGGTCGG-CGTCAGACC 16301 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753 | | | ||| | || || || ||||||| |||||| | |||| |||| | || Sbjct 16300 GGCCAGGTACGAGTTTTCCACAAACCCACGCGACTCGGGACCGTAGTCGTCCTTGATGAA 16241 Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813 || ||||| || | || | ||| | ||||| ||||| || || ||||||||||| Sbjct 16240 ATGGGGCAGTGTGCGCTTGCGGAACCCGAACGGGATGCGCTTACCCTCCACGTTCTGCTG 16181 Query 302814 TCCCAGGCACGAAATCATCTG-CGAA 302838 || | ||| | ||| | ||| |||| Sbjct 16180 ACCGACGCAAGCAATAACCTGTCGAA 16155 >seq15509 Length=15336 Score = 100 bits (110), Expect = 8e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| |||||| ||||||||||||||| || |||||||| | |||||| || || Sbjct 630 GCACCGTGCGAAATCTGACAATCACGCTCCATCTCGCCGAAACGCAAACCACCGTCACGC 689 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | |||||| || || ||| |||| | || |||||| | || ||| Sbjct 690 GCACGACCCTCCATCGGTTGGCGAACGAGAATCTGCACGGGACCGCGCGCACGCGAATGG 749 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||| || | ||||| ||||| |||||||||||| | | |||||||| |||| Sbjct 750 ATCTTGTCGTCCACCATGTGCTTCAGACGCTGGTAGTAGGTGGGACCGAGAAAGA 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471425850908838